Pairwise Alignments

Query, 313 a.a., universal stress protein from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., universal stress protein UspE (RefSeq) from Shewanella loihica PV-4

 Score =  107 bits (266), Expect = 5e-28
 Identities = 84/323 (26%), Positives = 151/323 (46%), Gaps = 23/323 (7%)

Query: 1   MKKFKNILFATQGLPGHSDALEQAIQLAYNNRGQLAGLIAFPAFPADLQRYQEPYEQSYL 60
           MK +  IL           AL +A++LA  N+  +   ++   F  ++      +E+  +
Sbjct: 1   MKDYHKILVVVDPTSDKQSALARAVELASKNQASITVFLSIFDFSYEMTSILSGHEREAM 60

Query: 61  NTLMETVEACRSQHHI--HKDE-VPFPLMVEHSEQPAVAIIKSALNHHIDLLIKEAEPMT 117
              +           +  +KD  V     V    +P  +II  A+    DL++K     T
Sbjct: 61  RQGVIAQRRAWLDDILGGYKDSGVAIDSEVIWHNRPFESIILHAIEGSYDLIVKG----T 116

Query: 118 HSQQGFKAL-----DMTLLRKCPCPVWLHRPLAKPKANRRVAVAIDPITTTEQQKALALR 172
           H     K++     D  L+RK P PV L +    P A + +  AI+  +  +  + L  +
Sbjct: 117 HEHDKLKSVIFTPTDWHLMRKAPVPVLLVKEHDWPVAGK-ILCAINVASEDDDHQTLNGK 175

Query: 173 LLELSRSIANTCDSRLHIVSCWEYYLENYLHDQVWIQVEQQQIAEEIAQAKIR--HEQAL 230
           ++E +  +A   D+++H+V+        Y    V + +E            IR  HEQ +
Sbjct: 176 IIEHALDLAKKFDAQVHLVN-------GYPGTPVNLAIELPDFDAHTYSETIRMQHEQRV 228

Query: 231 RQLIDESGITGELVIHHLHGKPDELIPEWVTQENIDILVMGTLARTGIAGFVIGNTAENI 290
             L    GI+ +   H   G P+++IPE   Q + +++++GT+ RTG +  +IGNTAE++
Sbjct: 229 CYLASNYGISSDFC-HIKEGLPEDVIPELAEQLDAELVILGTVGRTGFSAALIGNTAEHV 287

Query: 291 VQSIECSLVALKPEGFVSPIKNE 313
           + SI C L+A+KP+G+ SP++ E
Sbjct: 288 IDSINCDLLAIKPDGYKSPLEEE 310