Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 974 a.a., Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B from Pseudomonas fluorescens FW300-N2E2

 Score =  479 bits (1232), Expect = e-139
 Identities = 313/899 (34%), Positives = 471/899 (52%), Gaps = 76/899 (8%)

Query: 48  TWVPGLDLNLSFRLDGLSFLFASLITGIGALIQIYALAYMKEKAARFSFHLYLTLFMLAM 107
           TW+P L L+   RLDG ++LF+ L+ GIG L+ +YA  YM        F  +   FM AM
Sbjct: 61  TWLPSLGLDFVLRLDGFAWLFSLLVLGIGTLVSLYARYYMSPDDPVPRFFAFFLAFMGAM 120

Query: 108 LGVVVSDNILLLFIFWELTTITSYLLIGFNHDKPVSRKNALQSLLVTGAGGLALLAGLIL 167
           LG+V+S N++ +  FWELT++ S+LLIG+ H +  +R+ A  +L+VTGAGGL LLAG++L
Sbjct: 121 LGLVISGNLIQMVFFWELTSLFSFLLIGYWHHRADARRGAYMALMVTGAGGLCLLAGVML 180

Query: 168 LGLMANSYQISVIIEHADHIAQHPWFMPSLILVLLGAFTKSAQFPFHFWLPNAMAAPTPV 227
           LG +  SY++  ++   D I  H  +   L L+L+GA +KSAQFPFHFWLP+AMAAPTPV
Sbjct: 181 LGHVVGSYELDKVLAAGDLIRAHGLYPILLPLILIGALSKSAQFPFHFWLPHAMAAPTPV 240

Query: 228 SAYLHSATMVKAGIYLLARLSPIYASSDFWFYCLTIVGAVTALWCALLAFKQTDLKLMLA 287
           SAYLHSATMVKAG++LLARL P  + S+ WFY +   GA T L  A  A  Q DLK +LA
Sbjct: 241 SAYLHSATMVKAGVFLLARLWPSLSGSEEWFYIVGGAGACTLLLGAYCAMFQNDLKGLLA 300

Query: 288 YSTNVALGKLTLLLGLGTEVALTAAVLFIFAHSFYKAALFMVVGNIDKATGTREREKLGN 347
           YST   LG +TLLLGL + +A  AAV  I  H+ +KA+LFM  G ID  +GTR+  KL  
Sbjct: 301 YSTISHLGLITLLLGLNSPLAAVAAVFHILNHATFKASLFMAAGIIDHESGTRDIRKLSG 360

Query: 348 LKSVLLLSLIAAVIAALSKSGVAPMLGFLSKEYMYKSSV-ESGIAWISLVLLLI----NA 402
           L  ++  +   A++A+ + +GV  + GFLSKE  +  +V  S  AW+ L L +I      
Sbjct: 361 LVRLIPFTATLAMVASAAMAGVPLLNGFLSKEMFFAETVFISATAWVELALPIIATIAGT 420

Query: 403 LMVALAIALLYKPFFGQATKESESHPPKAIEQKKSLWLPAMGLAIASFLLPVFALDWINQ 462
             VA ++      FFG A  +    P    E  + +  P   L     ++ +F    +  
Sbjct: 421 FSVAYSLRFTVDVFFGPAATDLPHTPH---EPPRWMRAPVELLVFTCLVVGIFPAQVVGS 477

Query: 463 HLVIPAVMAMDPNSVPQAAKLWQGFNIPLALSGITLVLGGVLYL--------NYATLVTW 514
            L   A+  +       +  +W G N P+ +S + +  G VLYL         +     +
Sbjct: 478 LLAAAALPVVGGTLPEYSLAIWHGLNAPMIMSLVAMSGGIVLYLLLRNQFRQGHIKHPPF 537

Query: 515 LTRLVKPLPKAEQMFDAVLAYLATLASWQTQMLQQKRSSGYMLLFFAVLALILIYQPLPL 574
           + RL       +++F+  L  +        +++  +R      LF+ VLA +L      L
Sbjct: 538 IGRL-----SGKRLFERCLVLMMRQGRRLERLISTRRLQAQ--LFWLVLAAVLAGLIPML 590

Query: 575 PAT--------FSASLFDVHFYEVAIALALIASALLCVLSTSRLLSVLALGMAGFMTTLV 626
            +T           S+  V  + +AIA AL A+         RL ++  + + G MT + 
Sbjct: 591 HSTLVWGDRPKIPGSIVFVSLWLLAIACALGAA---WQAKYHRLAALTMVSVCGLMTCVT 647

Query: 627 FMIYSAPDVAKTLLLVETLMVVFVVLLMRHVPY-------LSTVARHSVPRRTLNAVIAS 679
           F+ +SAPD+A T L+VE +  V ++L +R +P        L    R +  RR  + +++S
Sbjct: 648 FVWFSAPDLALTQLVVEVVTTVLILLGLRWLPRRIEDVSPLPNSERRARIRRLRDLLLSS 707

Query: 680 VIGASVTLILLNITAHPIDTTLSDYFAQQSVPGGHGRNIVNVILVDFRAFDTLGEVIVVV 739
            +G  + L+   +        +S ++  +++P G G N+VNV+LVDFR FDTLGE+ V+V
Sbjct: 708 AVGGGMALLSYAMLTRQTPNDISSFYLSRALPEGGGSNVVNVMLVDFRGFDTLGEITVLV 767

Query: 740 MASLVAISLL-----PKRTEQ---------PQKIHSLI-----------FATTAHIVTAL 774
             +L   +LL     PK + Q         P  +  L+           F     ++  L
Sbjct: 768 AVALAVFALLRRFRPPKESMQLPAQQRLLAPDVVTDLVNPRHASDTALGFMMVPSVLVRL 827

Query: 775 M----LMFSLYLLLRGHNAPGGGFIGALIAVIGFSLLLFAESPQYVRDRLHFSPLNIALF 830
           +    L+ S YL +RGHN PGGGF+  L+  + F L       Q+V  ++   PL     
Sbjct: 828 LLPIALVVSFYLFMRGHNQPGGGFVAGLVMSVAFILQYMVAGTQWVEAQMSLRPLRWMGT 887

Query: 831 GILLSFMAGAMSVAVGLPFLTGLWWKEILPL------GTPLLFDVGIYLAIIGGVMSML 883
           G+L +   G  ++AVG PFLT   W   LPL       + L FD+G+Y  ++G  + +L
Sbjct: 888 GLLFATATGLGAMAVGYPFLTTHTWHFKLPLLGDLHVASALFFDIGVYAVVVGSTLLIL 946