Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 617 a.a., NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) from Pseudomonas fluorescens FW300-N2E2

 Score =  206 bits (523), Expect = 5e-57
 Identities = 157/487 (32%), Positives = 248/487 (50%), Gaps = 36/487 (7%)

Query: 41  GGNAWQVTW----VPGLDLNLSFRLDGLSFLFASLITGIGALIQIYALAYMKEKAARFSF 96
           GG   QV W    V G   N +  LDGLS     ++ G+G LI ++A  YM+ +A    F
Sbjct: 59  GGVYVQVLWRWMAVEGFTPNFALYLDGLSITMLGVVVGVGFLIHLFASWYMRGEAGYSRF 118

Query: 97  HLYLTLFMLAMLGVVVSDNILLLFIFWELTTITSYLLIGFNHDKPVSRKNALQSLLVTGA 156
             Y  LF+ +ML +V+ DN+L L+  WE   + SYLLIGF +    +   AL++ +VT  
Sbjct: 119 FAYTNLFIASMLFLVLGDNLLFLYFGWEGVGLCSYLLIGFYYSNRNNGNAALKAFIVTRI 178

Query: 157 GGLALLAGLILLGLMANSYQIS-VIIEHADHIAQHP-WFMPSLILVLLGAFTKSAQFPFH 214
           G + +  GL +L     +  I  ++++  +H      W + + +++L GA  KSAQ P  
Sbjct: 179 GDVFMAIGLFILFQQLGTLNIQELLVKAPEHFKVGDFWIVLATLMLLGGAVGKSAQLPLQ 238

Query: 215 FWLPNAMAAPTPVSAYLHSATMVKAGIYLLARLSPIYASSDFWFYCLTIVGAVTALWCAL 274
            WL +AMA PTPVSA +H+ATMV AG+YL+AR   ++A +    + + IVG VT +    
Sbjct: 239 TWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFALAPDILHLVGIVGGVTLVLAGF 298

Query: 275 LAFKQTDLKLMLAYSTNVALGKLTLLLGLGTEVALTAAVLFIFAHSFYKAALFMVVGNID 334
            A  QTD+K +LAYST   +G + L LG+G   A   A+  +  H+F+KA LF+  G + 
Sbjct: 299 AALVQTDIKRILAYSTMSQIGYMFLALGVG---AWEGAIFHLMTHAFFKALLFLASGAVI 355

Query: 335 KATGTRER-EKLGNLKSVLLLSLIAAVIAALSKSGVAPML--GFLSKEYMYKSSVESGIA 391
            A    +   K+G L   L L+  + ++   + + + P++  GF SK+ +   +  SG  
Sbjct: 356 VACHHEQNIFKMGGLWKKLPLAYTSFIVGGAALAAL-PLVTAGFYSKDEILWEAFASGNQ 414

Query: 392 WISLVLLLINALMVAL-AIALLYKPFFGQATKESESHPPKAIEQKKSLWLPAMGLAIASF 450
            + L   L+ A M +L    L++  F G+A  ++E+H    I      WLP   L + S 
Sbjct: 415 AL-LYAGLVGAFMTSLYTFRLIFIAFHGEA--KTEAHAGHGIAH----WLPLSVLIVLST 467

Query: 451 LLPVFALDWINQHLVIPAVMAMDPNSVPQA-AKLWQGFNI---PLALSGITLVLGGVLYL 506
            +           ++ P +  + P SV  A  +      I    +AL+GI  +L  +L+L
Sbjct: 468 FVGA---------MITPPLADVLPQSVGHAGGEAKHSLEIASGAIALAGI--LLAALLFL 516

Query: 507 NYATLVT 513
                VT
Sbjct: 517 GKRRFVT 523