Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit from Pseudomonas stutzeri RCH2

 Score =  166 bits (420), Expect = 3e-45
 Identities = 127/439 (28%), Positives = 212/439 (48%), Gaps = 11/439 (2%)

Query: 26  LPILLFGWVFYWHQTGGN-AWQVTWVPGLDLNLSFRLDGLSFLFASLITGIGALIQIYAL 84
           L +LL G + Y    G    + V  +PG  L L  + D L+ LF +L + + AL  IYA+
Sbjct: 43  LKLLLVGGMLYGVSQGSEYRFSVPLLPGAPLVL--QADALALLFVALSSLLWALTTIYAI 100

Query: 85  AYMKEKAARFSFHLYLTLFMLAMLGVVVSDNILLLFIFWELTTITSYLLIGFNHDKPVSR 144
            Y+++   R  F  Y +L + A +G+ ++ N++   +F+EL T+ ++ L+  +   P S 
Sbjct: 101 GYLEDSPLRSRFFGYFSLCVSATVGLALAGNLVSFLLFYELLTLATFPLV-VHRGTPESL 159

Query: 145 KNALQSLLVTGAGGLALLAGLILLGLMANSYQISVIIEHADHIAQHP-WFMPSLILVLLG 203
           +     L  T  GG  +L G+ LL  +A +          + + +H      +  L++LG
Sbjct: 160 RAGRVYLAYTVGGGTLVLMGVALLHSLAGTPDFQAAGYLLEQVGEHDVGLRVAFALLILG 219

Query: 204 AFTKSAQFPFHFWLPNAMAAPTPVSAYLHSATMVKAGIYLLARLS-PIYASSDFWFYCLT 262
              K+A  P H WLP AM AP PVSA LH+  +VKAG + + R+   ++ +       LT
Sbjct: 220 LGVKAALIPLHGWLPQAMVAPAPVSALLHAVAVVKAGAFGIVRVVYDVFGAEALTQLDLT 279

Query: 263 I----VGAVTALWCALLAFKQTDLKLMLAYSTNVALGKLTLLLGLGTEVALTAAVLFIFA 318
                + A T L+ +L A +Q +LK  LAYST   +  +TL + L   +A    ++ +  
Sbjct: 280 KPLLWLAAATILYGSLRALQQQELKKRLAYSTISQVSYVTLGVALLGPIAAVGGLVHLVH 339

Query: 319 HSFYKAALFMVVGNIDKATGTREREKLGNLKSVLLLSLIAAVIAALSKSGVAPMLGFLSK 378
               K  LF   GN  +  G     ++  +   +  ++ A  I AL   G+ P+ GF+SK
Sbjct: 340 QGLMKVTLFYCAGNFAETLGIHRIREMDGVGRRMPWTMTAFSIGALGMIGIPPIAGFISK 399

Query: 379 EYMYKSSVESGIAWISLVLLLINALMVALAIALLYKPFFGQATKESESH-PPKAIEQKKS 437
             +   ++E G  W+ LVLL    L  A  + LL++ +F +     E+    +  E    
Sbjct: 400 WTLGLGALEVGQDWVLLVLLGSALLNAAYFLPLLWRGWFAEPADWHENRWAEERFETHWM 459

Query: 438 LWLPAMGLAIASFLLPVFA 456
           L LP +  A+ S L+ + A
Sbjct: 460 LLLPPVITALLSLLVGLLA 478



 Score = 26.6 bits (57), Expect = 0.004
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 11/96 (11%)

Query: 802 IGFSLLLFAESPQYVRDRLHFSPLNIALFGILLSFMAGAMSVAVGLPFLTGLWWKEILPL 861
           +  S LL+A +  Y    L  SPL    FG     ++  + +A+    ++ L + E+L L
Sbjct: 85  VALSSLLWALTTIYAIGYLEDSPLRSRFFGYFSLCVSATVGLALAGNLVSFLLFYELLTL 144

Query: 862 GT-PLLFDVG---------IYLA-IIGGVMSMLLRV 886
            T PL+   G         +YLA  +GG   +L+ V
Sbjct: 145 ATFPLVVHRGTPESLRAGRVYLAYTVGGGTLVLMGV 180