Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 930 a.a., NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit from Pseudomonas stutzeri RCH2

 Score =  525 bits (1351), Expect = e-153
 Identities = 328/868 (37%), Positives = 494/868 (56%), Gaps = 42/868 (4%)

Query: 49  WVPGLDLNLSFRLDGLSFLFASLITGIGALIQIYALAYMKEKAARFSFHLYLTLFMLAML 108
           W+P L LNLS RLDGL FLFA LI GIG L+ +YA  Y+ +K     F+ +  LFM AML
Sbjct: 62  WLPQLGLNLSLRLDGLGFLFALLILGIGLLVILYARYYLSKKDPMGRFYGFFLLFMGAML 121

Query: 109 GVVVSDNILLLFIFWELTTITSYLLIGFNHDKPVSRKNALQSLLVTGAGGLALLAGLILL 168
           GVV+S+N+LL+ +FWELT+++S+LLIG+ + +  +R+ A  +L VTG GGLALLAG++L+
Sbjct: 122 GVVLSENLLLMLMFWELTSLSSFLLIGYWNYRADARQGARMALAVTGGGGLALLAGILLI 181

Query: 169 GLMANSYQISVIIEHADHIAQHPWFMPSLILVLLGAFTKSAQFPFHFWLPNAMAAPTPVS 228
           G +  S++++ ++   D I  +  +  +LILVLLG FTKSAQFPFHFWLP AMAAPTPVS
Sbjct: 182 GYIVGSFELTTVLASGDLIRANALYPVALILVLLGVFTKSAQFPFHFWLPQAMAAPTPVS 241

Query: 229 AYLHSATMVKAGIYLLARLSPIYASSDFWFYCLTIVGAVTALWCALLAFKQTDLKLMLAY 288
           A+LHSATMVKAG++LLARL P  A S++WFY ++I G  T L  A++A  Q DLK +LAY
Sbjct: 242 AFLHSATMVKAGVFLLARLYPALAESEWWFYLVSITGLTTLLLGAVMALFQHDLKGLLAY 301

Query: 289 STNVALGKLTLLLGLGTEVALTAAVLFIFAHSFYKAALFMVVGNIDKATGTREREKLGNL 348
           ST   LG +TLL GL + +A  AA+  I  H+ +KA+LFM  G ID  TGTR+  ++  +
Sbjct: 302 STISHLGLITLLFGLDSRLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRINGM 361

Query: 349 KSVLLLSLIAAVIAALSKSGVAPMLGFLSKEYMYKSSVESGIA----W-ISLVLLLINAL 403
              +  +   A++A+L+ +GV  + GFLSKE  +  +++  +     W I     L  A 
Sbjct: 362 WKYMPHTAALAMVASLAMAGVPLLNGFLSKEMFFAETLDQHLLGSFYWTIPAAATLAGAF 421

Query: 404 MVALAIALLYKPFFGQATKESESHPPKAIEQKKSLWLPAMGLAIASFL---LPVFALDWI 460
            VA ++  ++  FF     +   +PP   E  + + +P   L +   L   LP F +   
Sbjct: 422 SVAYSLRFVHDVFFNGEPIDLPKYPPH--EPARYMKIPVEILVLLCLLVGMLPAFTVG-- 477

Query: 461 NQHLVIPAVMAMDPNSVPQ-AAKLWQGFNIPLALSGITLVLGGVLYLNYATLVTWLTRLV 519
              L+  AV      +VP+ +  +W GFN+PLA+S + L+ G ++Y    +L  W  R  
Sbjct: 478 --PLLAAAVSGTLNGNVPEYSLSIWHGFNLPLAMSFVALIGGILIY----SLRKWAFRWY 531

Query: 520 KPLPKAE--QMFDAVLAYLATLASWQTQMLQQKRSSGYMLLFFAVLALILIYQPLPLPAT 577
           + LP  +  ++F+ V+A L   A + T +L+      Y+ L      +++++   PL   
Sbjct: 532 EGLPTVDSLEVFERVMAGLTLGARYITSLLENGSLQRYIALMLISTLVLVVFALTPLQTL 591

Query: 578 F-SASLFDVHFYEVAIALALIASALLCVL-STSRLLSVLALGMAGFMTTLVFMIYSAPDV 635
             + +L  +    VA  + L  ++LL VL    RL++++ L + G M  L F  YSAPD+
Sbjct: 592 HGTVALTPLDGITVAGMVILALTSLLTVLFHRRRLVALMVLSVVGLMVALGFARYSAPDL 651

Query: 636 AKTLLLVETLMVVFVVLLMRHVPYLSTVARHSVPRRTLNAVIASVIGASVTLILLNITAH 695
           A T L VE + ++ ++L +  +P   T A  S  R   + ++A   G  V L+   +   
Sbjct: 652 ALTQLSVEVVTIILLILALFFMPD-RTPAESSSLRAFRDFILAGGCGTMVALLAYTVLTR 710

Query: 696 PIDTTLSDYFAQQSVPGGHGRNIVNVILVDFRAFDTLGEVIVVVMASLVAISLL-PKRTE 754
           P D +++ +F + SV GG G N+VNVILVDFR FDTLGE+ V+ +A +   SLL   R  
Sbjct: 711 PYD-SIASFFLENSVSGGGGTNVVNVILVDFRGFDTLGEIAVLAIAGVGIYSLLYGLRLP 769

Query: 755 QPQK----------IHSLIFATTAHIVTALMLMFSLYLLLRGHNAPGGGFIGALIAVIGF 804
            P +           H ++    A  +  + L+ S ++ LRGHN PGGGFI  LI  +  
Sbjct: 770 HPIRDAGGRLWSLDKHPMMLDALARALLPMALLISAFIFLRGHNLPGGGFIAGLITAVAL 829

Query: 805 SLLLFAESPQYVRDRLHFSPLNIALFGILLSFMAGAMSVAVGLPFLTGLWWKEILP---- 860
            L   A    + + R  FS   +   G+L++   G  S+  G  FLT  +    LP    
Sbjct: 830 ILQYIAHGVAWAQARQPFSYHAMCGAGLLIAGATGLGSLLFGHSFLTSAFDHFHLPLIGE 889

Query: 861 --LGTPLLFDVGIYLAIIGGVMSMLLRV 886
             L T +LFD+G+YL ++G  + +L  +
Sbjct: 890 FELATAMLFDLGVYLVVVGATLLILSNI 917