Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 612 a.a., NAD(P)H-quinone oxidoreductase subunit F from Synechococcus elongatus PCC 7942

 Score =  151 bits (382), Expect = 1e-40
 Identities = 126/461 (27%), Positives = 214/461 (46%), Gaps = 41/461 (8%)

Query: 52  GLDLNLSFRLDGLSFLFASLITGIGALIQIYALAYMKEKAARFSFHLYLTLFMLAMLGVV 111
           G +L+  +     + +  ++ITG+    QIYA+ Y++       F  YL+LF   + G+V
Sbjct: 75  GFELSFDWSSTTAALVALTVITGLTWFSQIYAIGYLERDWGWARFFGYLSLFEAGLSGLV 134

Query: 112 VSDNILLLFIFWELTTITSYLLIGFNHDKPVSRKNALQSLLVTGAGGLALLAGLILLGLM 171
           + D++   ++  E+ T+ +YL++G+ +++P+    A  + L    G L LL G++ L  +
Sbjct: 135 LCDSLFFSYVILEMLTLGTYLIVGYWYNQPLVLTGARDAFLTKRIGDLILLVGVLGLLPL 194

Query: 172 ANSYQISVIIEHADHIAQHPWFMPSLILVLLGAFTKSAQFPFHFWLPNAMAAPTPVSAYL 231
           A ++    + E A             I ++ G   K AQFPFH WL  AM  P P S  L
Sbjct: 195 AGTWNFDQLAEWASTAEPSLALTAIAIALIAGPLGKCAQFPFHLWLDEAMEGPLP-STIL 253

Query: 232 HSATMVKAGIYLLARLSPIYASSDFWFYCLTIVGAVTALWCALLAFKQTDLKLMLAYSTN 291
            +A +V +G ++L R+ PI A+       L  VG VTA+  +L+A  Q D+K  L+Y  +
Sbjct: 254 RNAIVVVSGAWVLIRIQPIIAAVPVAETLLISVGVVTAICASLIAIAQVDVKRALSYLVS 313

Query: 292 VALGKLTLLLGLGTEVALTAAVLFIFAHSFYKAALFMVVGNIDKATGTREREKLGNLKSV 351
             +G + + +G G  +   AA   +  +S   A L M VG I     +++  +LG L S 
Sbjct: 314 TWMGLVFIAVGAGQTI---AAERLLLVYSLSMALLMMSVGTIVIRNISQDITQLGGLWSR 370

Query: 352 LLLSLIAAVIAALSKSGVAPMLGFLS----KEYMYKSSVESGIAWISLVLLLINALMVAL 407
             L  +A  +  LS   + P  GF +     E ++  S      W+ +VL+ + A  V  
Sbjct: 371 RPLPALAFALGGLSLLAMPPFGGFWAWLGLAEGLWPVS-----PWLVIVLVFVLA-AVGF 424

Query: 408 AIALLYKPFFGQATKESESHPPKAIEQKKSLWLPAMGLAIASFLLPVFALDWINQHLVIP 467
            +A ++   +G  +K        ++   + LWL          +LP+  L  +  HL   
Sbjct: 425 GLARIFARIWGGPSK------AMSVRSAEVLWL---------MVLPMLVLAGLTLHL--- 466

Query: 468 AVMAMDPNSVPQAAKLWQGFNIPLALSGITLV---LGGVLY 505
                 P  + QA  L Q  N+ + L   +LV    G V+Y
Sbjct: 467 ------PILLAQAGLLPQLNNLAIPLVWASLVGVATGTVVY 501