Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., NAD(P)H-quinone oxidoreductase subunit F from Synechococcus elongatus PCC 7942

 Score =  179 bits (454), Expect = 5e-49
 Identities = 135/461 (29%), Positives = 218/461 (47%), Gaps = 27/461 (5%)

Query: 44  AWQVTWVPGLDLNLSFRLD--GLSFLFASLITGIGALIQIYALAYMKEKAARFSFHLYLT 101
           AW   W+   DL+L+F L+   LS     L+TG+  L Q++AL Y++   +   F   + 
Sbjct: 70  AWH--WLQAADLDLTFTLEISSLSLGAMELVTGLSCLAQLFALGYLERDWSLARFFALMG 127

Query: 102 LFMLAMLGVVVSDNILLLFIFWELTTITSYLLIGFNHDKPVSRKNALQSLLVTGAGGLAL 161
            F  A+ G+ +SD++ L +   EL T+++YLL+GF + +P+    A  + L    G + L
Sbjct: 128 FFEAAISGIAISDSLFLSYGLLELLTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDVFL 187

Query: 162 LAGLILLGLMANSYQISVIIEHADHIAQHPWFMPSLILVLL-GAFTKSAQFPFHFWLPNA 220
           L G++ L         S +   ++  +  P     L L L+ G   K AQFP H WL  A
Sbjct: 188 LMGVVALSSYGTGLTFSELERWSETASLPPLQATLLGLALIAGPIGKCAQFPLHLWLDEA 247

Query: 221 MAAPTPVSAYLHSATMVKAGIYLLARLSPIYASSDFWFYCLTIVGAVTALWCALLAFKQT 280
           M  P P S  + ++ +V AG Y+L +L P+   S      L  +G +TA+  +L+A  Q 
Sbjct: 248 MEGPNPAS-IMRNSVVVAAGAYILIKLQPVVTLSPIVSNVLIAIGVLTAIGGSLVAIAQI 306

Query: 281 DLKLMLAYSTNVALGKLTLLLGLGTEVALTAAVLFIFAHSFYKAALFMVVGNIDKATGTR 340
           D K  L++ST+  LG + + +G   + A+  A+L +F H+  KA  FM VG+I   T  +
Sbjct: 307 DFKRALSHSTSAFLGLVFIAVG---QQAVDIALLLLFCHAVAKALQFMSVGSIIATTSNQ 363

Query: 341 EREKLGNLKSVLLLSLIAAVIAALSKSGVAPMLGFLSKEYMYKSSVESGIAWISLVLLLI 400
           +  ++G L S +  + IA V+ +L      P+  F +         E+ + W+ L+L+ +
Sbjct: 364 DMREMGGLWSRMPATTIAFVVGSLGLVACLPLGNFWTFRRWVNGFWEAPV-WLPLLLIFV 422

Query: 401 NALMVALAIALLYKPFFGQATKESESHPPKAIEQKKSLWLPAMGLAIASFLLPVFALDWI 460
           N L       +    F GQ   ++   P    E    + +P + L I    LP+F   W 
Sbjct: 423 NLLSAINFARIFNWVFLGQPHAKTRRAP----EVPWPMAVPIVSLVIVVLSLPLFLQQW- 477

Query: 461 NQHLVIPAVMAMDPNS------VPQAAK-----LWQGFNIP 490
            Q LV  A   +   S      +P  A       W GF IP
Sbjct: 478 -QLLVTWAAPLLADGSWLNHYAMPLIAASGGIGFWLGFQIP 517