Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  160 bits (404), Expect = 2e-43
 Identities = 113/376 (30%), Positives = 204/376 (54%), Gaps = 23/376 (6%)

Query: 59  FRLDGLSFLFASLITGIGALIQIYALAYMKEK--AARFS------FHLYLTLFMLAMLGV 110
           F  D LS + A ++T +G    ++++ Y++ +  A ++S      + +  ++F+  M  V
Sbjct: 67  FHADALSAVVAIVVTFVGLAATLFSIGYLRHEVEAGQYSQTRLPVYFVLNSVFIATMAAV 126

Query: 111 VVSDNILLLFIFWELTTITSYLLIGFNHDKPVSRKNALQSLLVTGAGGLALLAGLILLGL 170
            V++N++++++  E TT+ S LL+ + + KP + +   + LL+   G    L G ++L  
Sbjct: 127 TVTNNVIMMYVVVEATTLASALLVTY-YRKPGAWEAGYKYLLLCSVGITMGLLGCVILYS 185

Query: 171 MA-------NSYQISVIIEHADHIAQHPWFMPSLILVLLGAFTKSAQFPFHFWLPNAMA- 222
            A        + QIS +   AD +      +   +L+++G  +K+   PFH WLP+A + 
Sbjct: 186 AAVPLLGGHRAMQISELATVADQLPPTA-VVVGCVLIIIGFGSKAGLIPFHAWLPDAHSQ 244

Query: 223 APTPVSAYLHSATMVKAGIYLLARLSPIYASSD--FWFYCLTIVGAVTALWCALLAFKQT 280
           +P+PVSA L   T+ K  IY +AR++ ++ +       +C+ ++GA+T L   + AF QT
Sbjct: 245 SPSPVSALLSGVTL-KVAIYAIARIASLFYAGHGALGVFCI-VLGAITMLGGIIAAFSQT 302

Query: 281 DLKLMLAYSTNVALGKLTLLLGLGTEVALTAAVLFIFAHSFYKAALFMVVGNIDKATGTR 340
           DLK +LAYS+   +G + + LG+G+ +    AV  +  H+  KA LF+  G +  + GT 
Sbjct: 303 DLKRLLAYSSVSQVGYIIMGLGIGSYLGFYGAVYHLMNHALDKAMLFLCTGLLLYSCGTT 362

Query: 341 EREKLGNLKSVLLLSLIAAVIAALSKSGVAPMLGFLSKEYMYKSSVESGIAWISLVLLLI 400
             E+LG  K   L++L    I AL+ SGV P+ GF SK  +Y ++ E+ + W   V LL 
Sbjct: 363 SIEELGKRKHSPLVAL-CFFIGALAISGVPPLNGFWSKFAIYTAAAEAHLWWALGVALLT 421

Query: 401 NALMVALAIALLYKPF 416
           + + +A+ +   Y  F
Sbjct: 422 SLITIAVLVRAGYLIF 437