Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  152 bits (383), Expect = 9e-41
 Identities = 122/427 (28%), Positives = 204/427 (47%), Gaps = 26/427 (6%)

Query: 17  SARLLPFAVLPILLFGWVFYWHQTGGNAWQVTWVP--GLDLNLSFRLDGLSFLFASLITG 74
           S  L+   V  + + G        G  A+ +  VP  GL  +L+F +DGLS +F  LI+ 
Sbjct: 33  SITLVGVGVACLAMLGLAVTALTVGPIAFDLGTVPLFGLTSSLAFTIDGLSAIFVILISV 92

Query: 75  IGALIQIYALAYMK----EKAARFSFHLYLTLFMLAMLGVVVSDNILLLFIFWELTTITS 130
           +G    +Y++ Y+     E A R+  ++   LF+  ML V  + +    F  WE  T+ S
Sbjct: 93  LGTASALYSVGYIAHYPDEDARRY--YVPFPLFIAGMLMVATTSDWFCFFFGWEFMTLVS 150

Query: 131 YLLIGFNHDKPVSRKNALQSLLVTGAGGLALLAGLILLGLMANSYQISVIIEHADHI-AQ 189
           Y L+ F +    +         +T    + L+  +I+LG    S   + + +    + A+
Sbjct: 151 YFLVTFENRDKENLSAGFIYFFMTQLTSMGLMLAIIVLGTWGGSTSFAAVAKTLGALQAE 210

Query: 190 HPWFMPSLI-LVLLGAFTKSAQFPFHFWLPNAM-AAPTPVSAYLHSATMVKAGIYLLARL 247
           +P  +  L+ L  +G  TK+  FP   WLP A  AAP  VSA L S  M+K GIY + R+
Sbjct: 211 NPVALYGLLSLFFIGFATKAGMFPLGIWLPKAHPAAPASVSALL-SGVMIKLGIYGMLRI 269

Query: 248 S----PIYASSDFWFYCLTIVGAVTALWCALLAFKQTDLKLMLAYSTNVALGKLTLLLGL 303
                P+  ++  W   +T+ G ++ L   L A  + D K +LA  +   +G + L LGL
Sbjct: 270 FLWALPLGEATHVWGMVITLFGVLSMLVGTLRALGEHDCKRLLAQHSIGQMGYVLLGLGL 329

Query: 304 GTEVA----LTAAVLFI------FAHSFYKAALFMVVGNIDKATGTREREKLGNLKSVLL 353
           G        L AA+ F+        H+ +K+ LF   G+I    GTR+ + LG L +V+ 
Sbjct: 330 GLTFLGSNPLFAALGFLGCLYHLINHACFKSLLFFNTGSILYRAGTRDLDSLGGLSAVMP 389

Query: 354 LSLIAAVIAALSKSGVAPMLGFLSKEYMYKSSVESGIAWISLVLLLINALMVALAIALLY 413
           L+   A++ ALS +G  P  GF+SK  +Y+S++   ++    +L  + A+ +       +
Sbjct: 390 LTAGCALVGALSIAGTPPFNGFVSKWLLYQSAIFGDVSTPVYILAAVVAIFIGTVTLASF 449

Query: 414 KPFFGQA 420
             + G A
Sbjct: 450 VKYMGTA 456