Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  214 bits (545), Expect = 1e-59
 Identities = 151/433 (34%), Positives = 230/433 (53%), Gaps = 28/433 (6%)

Query: 46  QVTWVPGLDLNLSFRLDGLSFLFASLITGIGALIQIYALAYMK-------EKAARFSFHL 98
           ++ W+          LD LS L   +IT  G L+ +Y+  YM          A    ++ 
Sbjct: 81  RLPWLASDQALFGLALDPLSCLMLVVITLCGFLVVLYSGGYMSLGNVEHPSDANLARYYF 140

Query: 99  YLTLFMLAMLGVVVSDNILLLFIFWELTTITSYLLIGFNHDKPVSRKNALQSLLVTGAGG 158
           ++ LF+ AM+G+V S N   LF+FWELTT+ S+ LI F  D   + K+A ++LL+T   G
Sbjct: 141 FVCLFITAMVGLVSSPNYFQLFLFWELTTLCSWGLISFYGDAE-ALKSAYKALLITHGAG 199

Query: 159 LALLAGLILLGLMANSYQISVIIEHADHIAQHPWFMPSLILVLLG--AFTKSAQFPFHFW 216
           L L A ++L+ +   S+         D I      + SL++  +G  A  K+AQFPF  W
Sbjct: 200 LFLAAAVVLIYVETGSFAF-------DAINLLTPGLKSLVIAFMGIAALAKAAQFPFFTW 252

Query: 217 LPNAMAAPTPVSAYLHSATMVKAGIYLLARLS-PIYASSDFWFYCLTIVGAVTALWCALL 275
           LP AMAAPTP S+YLH+A MVKAGIYLLARL+  + A        L+++  VT     +L
Sbjct: 253 LPTAMAAPTPASSYLHAAAMVKAGIYLLARLALSVDAFPPELGLALSVIAIVTMCLAVVL 312

Query: 276 AFKQTDLKLMLAYSTNVALGKLTL---LLGLGTEVALTAAVLFIFAHSFYKAALFMVVGN 332
            F Q DLK +LA+ST   LG + L   +  +G+  AL   +L +  HSF K+ LF+ VG 
Sbjct: 313 YFPQDDLKRLLAFSTIANLGYMVLGIAMGAMGSRTALEGGMLHLVGHSFTKSLLFLAVGA 372

Query: 333 IDKATGTREREKLGNLKSVLLLSLIAAVIAALSKSGVAPMLGFLSKEYMYKSSVESGIAW 392
           I  ATGTR+   L  L   + ++ +A V+ A++ SG+ P   F SK  +   ++E    W
Sbjct: 373 ISYATGTRKIGLLSGLGRKMPVTALAFVLGAMAISGMPPFNMFWSKYLIVSGAIELSSTW 432

Query: 393 ---ISLVLLLINALMVALAIALLYKPFFGQATKESESHPPKAIEQKKSLWLPAMGLAIAS 449
              ++++ L  +    A  + +++K FFG  +  +E+    A +   ++ +P + L   S
Sbjct: 433 GWTLAVLTLAESVAGFAWFLHIVHKVFFGPVSPTAEN----ARDPGAAMLIPLIVLMAFS 488

Query: 450 FLLPVFALDWINQ 462
            L  VFAL  I Q
Sbjct: 489 VLSTVFALPMIQQ 501