Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 615 a.a., NADH dehydrogenase I, L subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  190 bits (482), Expect = 3e-52
 Identities = 128/392 (32%), Positives = 204/392 (52%), Gaps = 16/392 (4%)

Query: 45  WQVTWVPGLDLNLSFRLDGLSFLFASLITGIGALIQIYALAYMKEKAARFSFHLYLTLFM 104
           WQ   V     + S  LDGLS     ++TG+G  I ++A  YM+ +     F  Y  LF+
Sbjct: 67  WQWMVVGNFTPSFSLALDGLSLTMLGVVTGVGFFIHLFASWYMRGEEGYSRFFTYTNLFI 126

Query: 105 LAMLGVVVSDNILLLFIFWELTTITSYLLIGFNHDKPVSRKNALQSLLVTGAGGLALLAG 164
            +ML +V++D++L +++ WE   + SYLLIGF +    +   AL++ +VT  G + L  G
Sbjct: 127 ASMLFLVLADDLLFVYLGWEGVGLCSYLLIGFYYKDRNNGAAALKAFIVTRVGDVFLAIG 186

Query: 165 LILLGLMANSYQISVIIEHADHIAQH--PWFMPSLILVLLGAFTKSAQFPFHFWLPNAMA 222
           L +L     +  I  ++  A  +     P    + +++L GA  KSAQ P   WL +AMA
Sbjct: 187 LFILYQELGTLNIHELLVRAPTLFAEGSPALSLACLMLLGGAVGKSAQLPLQTWLADAMA 246

Query: 223 APTPVSAYLHSATMVKAGIYLLARLSPIYASSDFWFYCLTIVGAVTALWCALLAFKQTDL 282
            PTPVSA +H+ATMV AG+YL+AR   ++  +    + + +VGA+T +     A  QTD+
Sbjct: 247 GPTPVSALIHAATMVTAGVYLIARTHGLFLLAPEVLHLVGLVGAITLVLAGFAALVQTDI 306

Query: 283 KLMLAYSTNVALGKLTLLLGLGTEVALTAAVLFIFAHSFYKAALFMVVGNIDKATGTRER 342
           K +LAYST   +G + L LG+G   A   A+  +  H+F+KA LF+  G +  A    + 
Sbjct: 307 KRILAYSTMSQIGYMFLALGVG---AWEGAIFHLMTHAFFKALLFLSAGAVIVACHHEQN 363

Query: 343 -EKLGNLKSVLLLSLIAAVIAALSKSGVAPML--GFLSKE---YMYKSSVESGIAWISLV 396
             K+G L+  L L + A  +   S     P++  GF SK+   +  ++S +S + W  L 
Sbjct: 364 IFKMGGLRKSLPL-VYACFLVGGSALAALPLVTSGFYSKDAILWQVEASGQSALLWAGLA 422

Query: 397 LLLINALMVALAIALLYKPFFG-QATKESESH 427
              + +L       L++  F G + TK    H
Sbjct: 423 GAFLTSL---YTFRLIFIAFHGKEQTKAHAGH 451