Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 648 a.a., Ech hydrogenase, subunit EchA, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  195 bits (496), Expect = 6e-54
 Identities = 145/427 (33%), Positives = 228/427 (53%), Gaps = 29/427 (6%)

Query: 59  FRLDGLSFLFASLITGIGALIQIYALAYMKE----------KAARFSFHLYLTLFMLAML 108
           F +D LS     +I+ +G LI +Y L YMKE          K  RF F  ++ LF+ AM 
Sbjct: 120 FYVDSLSLTMVLIISFVGGLICVYGLGYMKEHEEHLHLPQTKQPRFFF--FVVLFLGAMN 177

Query: 109 GVVVSDNILLLFIFWELTTITSYLLIGFNHDKPVSRK-NALQSLLVTGAGGLALLAGLIL 167
           G+V+S+N+  ++ FWE+TT+ S++LIG  HD     K NA ++L +   GG+A +  L+ 
Sbjct: 178 GLVLSNNLAWMYFFWEITTLCSFMLIG--HDGTDEAKTNATRALWMNMVGGVAFVFALLF 235

Query: 168 LGLMANSYQISVIIEHA--DHIAQHPWFMPSLILVLLGAFTKSAQFPFHFWLPNAMAAPT 225
           L     +  +  I+  A    +      +P  +L L G FTKSAQ PF  WL  AM APT
Sbjct: 236 LQKGMGTLSVQDILARAVEPEMRTTAVLLPMAMLCLAG-FTKSAQLPFQSWLCGAMVAPT 294

Query: 226 PVSAYLHSATMVKAGIYLLARLSPIYASSDFWFYCLTIVGAVTALWCALLAFKQTDLKLM 285
           PVSA LHS+TMVKAG+YL+ R++P YA +      + + GA T +  + LA  Q++ K +
Sbjct: 295 PVSALLHSSTMVKAGVYLILRMAPGYAGTAL-STGVALFGAFTFIVTSALAAGQSNGKKI 353

Query: 286 LAYSTNVALGKLTLLLGLGTEVALTAAVLFIFAHSFYKAALFMVVGNIDKATGTREREKL 345
           LAYST   LG +    G+ T  ++ AA++ I  H+  K  LF+ VG I++  G+R  E +
Sbjct: 354 LAYSTIANLGLIVACAGINTAASVAAAMMLIIFHAISKGLLFLCVGAIEQKIGSRNIEDM 413

Query: 346 GNLKSVLLLSLIAAVIAALSKSGVAPMLGFLSKEYMYKSSVESGIAWISLVLLLINALMV 405
            NL   +  + +  VI  ++   + P  G L  ++M   ++ES    +S + LL+  + +
Sbjct: 414 RNLFERMPRTAVITVIGIVTM--MLPPFGMLIAKWM---AIESAAGAMSAMPLLVIMIAL 468

Query: 406 ALAIALLYKPFFGQATKESESHP---PKAIEQKKSLWLPAMGLAIASFLLPVFALDWINQ 462
             A+ +L+   +      S S P   P   EQ  ++ LP + L   + +L + A  ++  
Sbjct: 469 GSALTVLFWARWAGIMLGS-SRPGFGPMQEEQDITIRLPLVSLVGGALVLSLLA-PFVYT 526

Query: 463 HLVIPAV 469
            LV PA+
Sbjct: 527 GLVEPAI 533