Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) from Pseudomonas fluorescens FW300-N2E2

 Score =  160 bits (404), Expect = 1e-43
 Identities = 131/509 (25%), Positives = 246/509 (48%), Gaps = 41/509 (8%)

Query: 10  VVISLLTAVAIFLAGRNR-WLTNGLSVICSVINLFTGALLTIT-IYTHGPASIAFGQWPA 67
           ++I  +  +  ++A R+   L   ++++   + L  G  L  T  Y+  PA  A   W  
Sbjct: 7   ILIPFIGGLLCWIAERSSSTLPRWIALLTMSLELALGLWLWATGDYSFAPAPGADPTWAL 66

Query: 68  PFGIVFVA----------DLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYHALLHVL 117
            F  +++           D LS+ M+++T ++G++SV+ +  ++     +  +H  L  +
Sbjct: 67  EFKHIWIERFGISVHLALDGLSLLMILLTGLLGILSVLCSWKEIQRHVGF--FHLNLMWI 124

Query: 118 LAGVYGAFLTGDIFNLYVWFEVMLIASFGLMVL------DANQQQIDGAIKYVLLNLIST 171
           L GV G FL  D+F  + ++E+ML+  + L+ L      D  + +I  A K+ +    S 
Sbjct: 125 LGGVIGVFLALDLFMFFFFWEMMLVPMYFLIALWGHSSSDGKKTRIYAATKFFIFTQASG 184

Query: 172 LVFLLSI-GLL---YGATG--TLNLADLHDKAQSLAPEMKTMLAGLLLFAFSIKAALFPL 225
           L+ L++I GL+   +  TG  T N ADL     S   E   ML      AF++K  + P 
Sbjct: 185 LIMLVAILGLVLVNFNNTGVITFNYADLLKVQMSKTTEYVLMLG--FFIAFAVKLPVVPF 242

Query: 226 FAWLPASYHTLPSAIVALFAALLTKVGVYALLRVFTLVFPLDGSGWQPVLLGIAALTMLT 285
            +WLP ++   P+A     A +L K   Y LLR    +FP   + + P+ + +  + +  
Sbjct: 243 HSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIGIFY 302

Query: 286 GVLGAASQYDIKKILSFHIISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLIGG 345
           G   A +Q DIK++++F  +S +G++++G+   + LA+ GA+  ++ H L    LF++ G
Sbjct: 303 GAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQLALQGAVIQMLAHGLSAAALFILSG 362

Query: 346 LIGRKYGTTQLTQLGGVYRAMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKASLAAELY 405
            +  +  T  + ++GG++  + +L    L  A +  G P    F G+FL++  S  +   
Sbjct: 363 QLYERLHTRDMREMGGIWSRIAYLPAISLFFAAASLGLPGTGNFVGEFLILIGSFVSS-P 421

Query: 406 WLAAIA---LLVGLLTIFSMTKIWNEVFWKDAPAALQQETLARSTLGLYALPILVLTLFS 462
           W+ AIA   L+ G  +++S+  I    F        + + + R   G   + +L L +  
Sbjct: 422 WITAIATSGLVFG--SVYSLIMIHRAYF-----GPSKSDEVLRGMDGRELIMVLGLAVLL 474

Query: 463 LVIGLAAQPFY--QFATLAAEQLLTPTAY 489
           + +G++ QPF     AT+   Q    TA+
Sbjct: 475 VYLGVSPQPFLDTSAATMHGVQQWLGTAF 503