Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., NADH:ubiquinone oxidoreductase subunit M from Pseudomonas fluorescens FW300-N2C3

 Score =  160 bits (406), Expect = 8e-44
 Identities = 124/444 (27%), Positives = 222/444 (50%), Gaps = 31/444 (6%)

Query: 65  WPAPFGIV--FVADLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYHALLHVLLAGVY 122
           W A FGI      D LS+ M+++T ++G++SV+ +  ++     +  +H  L  +L GV 
Sbjct: 72  WIARFGISVHLALDGLSLLMILLTGLLGILSVLCSWKEIQRHVGF--FHLNLMWILGGVV 129

Query: 123 GAFLTGDIFNLYVWFEVMLIASFGLMVL------DANQQQIDGAIKYVLLNLISTLVFLL 176
           G FL  D+F  + ++E+ML+  + L+ L      D  + +I  A K+ +    S L+ L+
Sbjct: 130 GVFLALDLFMFFFFWEMMLVPMYFLIALWGHSSSDGKKTRIYAATKFFIFTQASGLIMLV 189

Query: 177 SI-GLL---YGATG--TLNLADLHDKAQSLAPEMKTMLAGLLLFAFSIKAALFPLFAWLP 230
           +I GL+   +  TG  T N ADL     S   E   ML      AF++K  + P  +WLP
Sbjct: 190 AILGLVLVNFNNTGVITFNYADLLKVQMSRTTEYVLMLG--FFIAFAVKLPVVPFHSWLP 247

Query: 231 ASYHTLPSAIVALFAALLTKVGVYALLRVFTLVFPLDGSGWQPVLLGIAALTMLTGVLGA 290
            ++   P+A     A +L K   Y LLR    +FP   + + P+ + +  + +  G   A
Sbjct: 248 DAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIGIFYGAFLA 307

Query: 291 ASQYDIKKILSFHIISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLIGGLIGRK 350
            +Q DIK++++F  +S +G++++G+   + LA+ GA+  ++ H L    LF++ G +  +
Sbjct: 308 FAQTDIKRLIAFSSVSHMGFVLIGIYSGSQLALQGAVIQMLAHGLSAAALFILSGQLYER 367

Query: 351 YGTTQLTQLGGVYRAMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKASLAAELYWLAAI 410
             T  + ++GG++  + +L    L  A +  G P    F G+FL++  S  +   W+ AI
Sbjct: 368 LHTRDMREMGGIWSRIAYLPAISLFFAAASLGLPGTGNFVGEFLILIGSFVS-APWITAI 426

Query: 411 A---LLVGLLTIFSMTKIWNEVFWKDAPAALQQETLARSTLGLYALPILVLTLFSLVIGL 467
           A   L+ G  +++S+  I    F    PA  + + + R   G   + +L L +  + +G+
Sbjct: 427 ATSGLVFG--SVYSLIMIHRAYF---GPA--KSDEVLRGMDGRELIMVLGLAVLLVYLGV 479

Query: 468 AAQPFY--QFATLAAEQLLTPTAY 489
             QPF     AT+   Q    TA+
Sbjct: 480 YPQPFLDTSAATMHGVQQWLGTAF 503