Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 486 a.a., NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) from Xanthomonas campestris pv. campestris strain 8004

 Score =  145 bits (367), Expect = 2e-39
 Identities = 110/431 (25%), Positives = 210/431 (48%), Gaps = 18/431 (4%)

Query: 41  NLFTGALLTITIYTHGPASIAFGQWPAPFGIVFVADLLSVGMVMVTAIIGLVSVIYAIAD 100
           +LF+ A+L + +      +   G+    F  +FV D  +  M  V  ++  +S++Y  + 
Sbjct: 46  HLFSVAVLAVVLVMLATGTGGQGE---AFHGMFVRDTAADVMKTVIVLVSGLSLVYGWSY 102

Query: 101 LSAKPSY-ARYHALLHVLLAGVYGAFLTGDIFNLYVWFEVMLIASFGLMVLDA-NQQQID 158
           L  +  Y      L+    AG+      G +  +Y+  E++ + S+ L+  +  N    +
Sbjct: 103 LRERNLYQGEIPVLVLFATAGMMLLTSAGSLLMVYLGLELLALCSYALVASNRDNGLATE 162

Query: 159 GAIKYVLLNLISTLVFLLSIGLLYGATGTLNLADLHDKAQSLAPEMKTMLAGLLLF---- 214
            A+KY +L  +++ + L  + L+YGATGTL+LA +HD  +  + E   +L G +      
Sbjct: 163 AAMKYFVLGSLASGLLLYGMSLVYGATGTLSLAGIHDAIEG-SGERTLLLTGTIFMIAGV 221

Query: 215 AFSIKAALFPLFAWLPASYHTLPSAIVALFAALLTKVGVYALL-RVFTLVFPLDGSGWQP 273
           AF + AA  P   WLP  Y   P+ I ALF +   K+  + +  R+  +        W  
Sbjct: 222 AFKLGAA--PFHMWLPDVYQGAPAPI-ALFISSAPKLAAFGMAYRLLEMGMGPLSPQWHL 278

Query: 274 VLLGIAALTMLTGVLGAASQYDIKKILSFHIISQIGYMIMGLAIYTPLAITGAIFYVIHH 333
           ++ G++AL+++ G L A +Q ++K++L++  +S IG+++MG+A         A+FY + +
Sbjct: 279 LIGGLSALSLVIGNLMAIAQSNLKRMLAYSTVSHIGFLLMGVAGGGEEGYAAAMFYAVSY 338

Query: 334 ILVKGNLF-LIGGLIGRKYGTTQLTQLGGVYRAMPWLTFGFLLAAFSLAGFPPLSGFWGK 392
            ++    F  I  L    +    +    G+    PW+    L    SLAG PP  GFW K
Sbjct: 339 TIMSTASFGAIIALSRSGFEAEHIDDFKGLNARNPWMAGLVLCIMASLAGIPPFLGFWTK 398

Query: 393 FLVIKASLAAELYWLAAIALLVGLLTIFSMTKIWNEVFWKD---APAALQQETLARSTLG 449
             V+ A++  ++ WLA + +L  ++  +   ++   +++ +    P    ++ +  + LG
Sbjct: 399 LAVLGAAVKGDMLWLAMVGVLCAVIGAYYYLRVIKVMYFDEPVGEPLPANKDRVLGTVLG 458

Query: 450 LYALPILVLTL 460
           + AL +L L L
Sbjct: 459 VNALALLALGL 469