Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) from Xanthomonas campestris pv. campestris strain 8004

 Score =  149 bits (377), Expect = 2e-40
 Identities = 123/467 (26%), Positives = 225/467 (48%), Gaps = 33/467 (7%)

Query: 19  AIFLAGRN----RWLTNGLSVICSVINLFTGALLTITIYTHGPASIAFGQWPAPFGIVFV 74
           A+ LA RN    RW +  ++V   V++L    LL           I    W   + I + 
Sbjct: 19  ALILALRNAETARWASLAVAVATFVLSL---PLLGYDTANDAMQFIEQHAWIPAYNIGYN 75

Query: 75  --ADLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYHALLHVLLAGVYGAFLTGDIFN 132
              D ++V ++++T ++ ++++I A   +  + +  +Y A   +L     G F   D   
Sbjct: 76  LGVDGIAVALIVLTTLVTVLALIGAWRSIDKRVN--QYVAAFLILEGVTVGIFAATDAML 133

Query: 133 LYVWFEVMLIASFGLMVLDANQQQIDGAIKYVLLNLISTLVFLLSIGLLYGATGTLNLAD 192
            YV+FE MLI  F ++ +    ++I  A+K+ L   + +++ L+ +  LY   G+  LAD
Sbjct: 134 FYVFFEAMLIPMFLIIGVWGGPRRIYAAMKFFLYTFLGSVLMLVGLIYLYLKGGSFQLAD 193

Query: 193 LHDKAQSLAPEMKTMLAGLLLFAFSIKAALFPLFAWLPASYHTLPSAIVALFAALLTKVG 252
           L+  A  L  + +T +    + AF++K  +FP+  WLP ++   P+A   + AA+  K+G
Sbjct: 194 LY--ALQLTAKEQTWIFFAFMIAFAVKVPMFPVHTWLPDAHVEAPTAGSVILAAIALKIG 251

Query: 253 VYALLRVFTLVFPLDGSGWQPVLLGIAALTMLTGVLGAASQYDIKKILSFHIISQIGYMI 312
            Y  LR    + P   + W  +++ ++ + ++   L A  Q D+KK++++  I+ +G++ 
Sbjct: 252 GYGFLRFNLPILPDASNQWAWLVIALSLIAVIYVGLVALVQDDMKKLVAYSSIAHMGFVT 311

Query: 313 MGLAI------------YTPLAITGAIFYVIHHILVKGNLFLIGGLIGRKYGTTQLTQLG 360
           +G  I               L + GA+  +I H  V G +F   G++  +  T ++   G
Sbjct: 312 LGTFIAFTLVREYGSTDAARLGLQGAMVQMISHGFVSGAMFSCIGVLYDRMHTRRIADYG 371

Query: 361 GVYRAMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKASLAAELYWLAAIALLVGLLTIF 420
           GV   MPW     +L   + AG P  SGF G+F+VI AS   + + L A A    L+   
Sbjct: 372 GVVNVMPWFATFAMLFFMANAGLPGTSGFVGEFMVILASF--QKHPLVAFAAATTLVITA 429

Query: 421 SMTK-IWNEVFW---KDAPAALQQETLARS--TLGLYALPILVLTLF 461
           + T  ++  VF+    +A  A  ++   R    LG++A  +L L L+
Sbjct: 430 AYTLWLYKRVFFGEVANAHVAELKDINGREAFVLGVFAAGVLALGLY 476