Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 502 a.a., NADH-quinone oxidoreductase subunit M from Synechocystis sp000284455 PCC 6803

 Score =  148 bits (374), Expect = 4e-40
 Identities = 108/393 (27%), Positives = 193/393 (49%), Gaps = 14/393 (3%)

Query: 88  IIGLVSVIYAIADLSAKPSYAR---YHALLHVLLAGVYGAFLTGDIFNLYVWFEVMLIAS 144
           ++ L +++  +A  S  P+  R   Y+ L+ ++ AG+ GA L  ++    V++E+ LI  
Sbjct: 84  LVILNNLLTGVAIYSIGPNVNRSRLYYGLILLINAGISGALLAQNLLLFIVFYELELIPF 143

Query: 145 FGLMVLDANQQQIDGAIKYVLLNLISTLVFLLSIGLLYGATGTLNLADLHDKAQSLAPEM 204
           + ++ +   +++   ++K++L    S L+ L +   +   +G+ +     +  Q+     
Sbjct: 144 YLMIAIWGGEKRGYASMKFLLYTAFSGLLVLAAFLGMSLLSGSHSFDYNPEITQTFTESA 203

Query: 205 KTMLAGLLLFAFSIKAALFPLFAWLPASYHTLPSAIVALFAALLTKVGVYALLRVFTLVF 264
           +T+L  L+L  F IK  L PL  WLP +Y     A   L   +L K+G Y ++R    +F
Sbjct: 204 QTILLILILLGFGIKIPLVPLHTWLPDAYTEASPATAILLGGILAKLGTYGIIRFGLQLF 263

Query: 265 PLDGSGWQPVLLGIAALTMLTGVLGAASQYDIKKILSFHIISQIGYMIMGLAIYTPLAIT 324
           P   + + PVL  I  +T+L G L A +Q DIK+++++  I  +GY+++  A  T L++ 
Sbjct: 264 PQTWAQFAPVLAIIGTVTVLYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTELSVL 323

Query: 325 GAIFYVIHHILVKGNLFLIGGLIGRKYGTTQLTQLGGV---YRAMPWLTFGFLLAAFSLA 381
           GA+  ++ H L+   LF + G++ RK GT  L  L G+    R +P  +   +    + A
Sbjct: 324 GAVAQMVSHGLILALLFHLVGIVERKAGTRDLDVLNGLMNPIRGLPLTSALLITGGMASA 383

Query: 382 GFPPLSGFWGKFLVIKASLAAELYWLAAIALLVGLLTIFSMTKIWNEVFWK-DAPAALQQ 440
           G P L GF  +F+V + S            L  GL  ++ +  +    F K D   A   
Sbjct: 384 GIPGLVGFAAEFIVFQGSFPTFPIPTLLCILASGLTAVYFVILLNRTCFGKLDNQRAYYP 443

Query: 441 ETLARSTLGLYALPILVLTLFSLVIGLAAQPFY 473
           + LA        +P LVLT  +++  L  QP Y
Sbjct: 444 KVLASE-----MIPALVLT--AIIFFLGVQPNY 469



 Score = 24.6 bits (52), Expect = 0.008
 Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 26/172 (15%)

Query: 85  VTAIIGLVSVIY----AIA--DLSAKPSYARYHALLHVLLAGVYGAFLTGDIFNLYVWFE 138
           V AIIG V+V+Y    AIA  D+    +Y+    + ++L+A   G         L V   
Sbjct: 273 VLAIIGTVTVLYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGT-------ELSVLGA 325

Query: 139 VMLIASFGLMVLDANQQQIDGAIKYVLLNLISTLVFLLSIGLLYGATGTLNLADLHDKAQ 198
           V  + S GL++          A+ + L+ ++        + +L G    +    L     
Sbjct: 326 VAQMVSHGLIL----------ALLFHLVGIVERKAGTRDLDVLNGLMNPIRGLPLTSALL 375

Query: 199 SLAPEMKTMLAGLLLFA--FSIKAALFPLFAWLPASYHTLPSAIVALFAALL 248
                    + GL+ FA  F +    FP F  +P     L S + A++  +L
Sbjct: 376 ITGGMASAGIPGLVGFAAEFIVFQGSFPTFP-IPTLLCILASGLTAVYFVIL 426