Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 490 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  167 bits (424), Expect = 6e-46
 Identities = 124/487 (25%), Positives = 222/487 (45%), Gaps = 26/487 (5%)

Query: 3   AIGLTLPVVISLLTAVAIFLAGRNRWLTNGLSVICSVINLFTGALLTITIYTHGPASIAF 62
           A+ L   +   L   + I L  +   L   + VI +++     A LT T+   G  ++  
Sbjct: 6   ALSLAWILATPLAATLVIALNAKRPRLGEAIGVIAALLTFAQVAALTPTVLAGGRPTLVM 65

Query: 63  GQWPAPFGIVFVADLLSVGMVMVTAIIGLVSVIYAIADLSA--KPSYARYHALLHVLLAG 120
                   +VF  D L +   +V A + + + +Y+IA L A  +    R+HA   + +A 
Sbjct: 66  LSVMDTIPLVFTLDPLGLLFALVAAALWIPAGLYSIAYLRANHEAHQPRFHAYFALAIAC 125

Query: 121 VYGAFLTGDIFNLYVWFEVMLIASFGLMVLDANQQQIDGAIKYVLLNLISTL-VFLLSIG 179
             G  L G++F L++++E + ++++ L+      Q +     Y+ + L+ ++ + L++I 
Sbjct: 126 TLGIALAGNLFTLFLFYEALTLSTYPLITHQGTAQAVRAGRIYMGMLLVPSIGLLLVAII 185

Query: 180 LLYGATGTLNLADLHDKAQSLAPEMKTMLAGLLLFAF---SIKAALFPLFAWLPASYHTL 236
           L +   G ++          LA  +   L GLLL  F   + KAAL P   WLPA+    
Sbjct: 186 LTHSLAGRMDF----QPGGILAGRIDGPLVGLLLALFVFGTAKAALMPFHRWLPAAMVAP 241

Query: 237 PSAIVALFAALLTKVGVYALLRVFTLVFPLD---GSGWQPVLLGIAALTMLTGVLGAASQ 293
                 L A  + K GV+ + +V   +F +D    S W   L  +A ++++   L A  Q
Sbjct: 242 TPVSALLHAVAVVKAGVFTIAKVVISIFGIDLLAASSWTGWLTWVAGISVILASLIALRQ 301

Query: 294 YDIKKILSFHIISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLIGGLIGRKYGT 353
            ++K+ L++  ISQ+ Y++M L++++PL +  A  +++ H   K  LF   G I      
Sbjct: 302 DNLKRRLAYSTISQLAYVVMALSLFSPLGVLAAGLHIVVHAFGKITLFFAAGAIHTATHK 361

Query: 354 TQLTQLGGVYRAMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKASLAAELYWLAAIALL 413
             ++Q  G+ RAMPW    F +A+ S+ G PP +GF  K+ +  A+   + + + A+ + 
Sbjct: 362 DSVSQFAGIGRAMPWTMGAFAVASLSMIGLPPTAGFLSKWGIFSAAFQGQTWGVVAVLIA 421

Query: 414 VGLLTIFSMTKIWNEVFWKDAPAALQQE-------------TLARSTLGLYALPILVLTL 460
             +L       I +  F K  P     +               A  TL L+ LP L  TL
Sbjct: 422 STVLNAAYFLPILHTAFLKPPPGEAGAKIAEAPPLMVAALCLTAFGTLALFFLPGLPFTL 481

Query: 461 FSLVIGL 467
              + G+
Sbjct: 482 ARQLAGV 488