Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., Proton-translocating NADH-quinone oxidoreductase, chain M (NCBI) from Rhodospirillum rubrum S1H

 Score =  132 bits (333), Expect = 2e-35
 Identities = 96/425 (22%), Positives = 198/425 (46%), Gaps = 13/425 (3%)

Query: 65  WPAPFGIVFVADLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYHALLHVLLAGVYGA 124
           W   +GI +   +  + ++ V     L  +    +  S       Y     VL   + G 
Sbjct: 72  WLPDYGINYQMGVDGISVLFVLLSTFLTPLCILASWTSITKRVKEYMVAFLVLETMMVGM 131

Query: 125 FLTGDIFNLYVWFEVMLIASFGLMVLDANQQQIDGAIKYVLLNLISTLVFLLSIGLLYGA 184
           F   D    YV+FE +LI  F ++ +    +++  + K+ L  L  +++ ++++  +Y  
Sbjct: 132 FCALDFVVFYVFFEGVLIPMFLIIGIWGGGRRVYASFKFFLYTLAGSVLMMVAMLAMYIE 191

Query: 185 TGTLNLADLHDKAQSLAPEMKTMLAGLLLFAFSIKAALFPLFAWLPASYHTLPSAIVALF 244
            GT ++  L   +      M+T L   +  +F++K  ++P+  WLP ++   P+A   + 
Sbjct: 192 AGTTDIPTL--MSHGFPAAMQTWLWLAMFASFAVKVPMWPVHTWLPDAHVEAPTAGSVIL 249

Query: 245 AALLTKVGVYALLRVFTLVFPLDGSGWQPVLLGIAALTMLTGVLGAASQYDIKKILSFHI 304
           A +L K+G Y  LR    + PL  + + P +  ++ + ++   L A  Q D+KK++++  
Sbjct: 250 AGVLLKMGAYGFLRFSIPMLPLASADFAPFIFALSVIGVIYTSLVALVQEDMKKLIAYSS 309

Query: 305 ISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLIGGLIGRKYGTTQLTQLGGVYR 364
           I+ + ++  G+     +++ GA++ ++ H +V G LFL  G++  +  T ++++ GG+ +
Sbjct: 310 IAHMAFVTAGIFAVNQMSVEGALYQMLSHGVVSGALFLCVGVVYDRLHTREISRYGGLAK 369

Query: 365 AMPWLTFGFLLAAFSLAGFPPLSGFWGKFL----VIKASLAAELYWLAAIALLVGLLTIF 420
            MP     F++   +  G P   GF G+FL    V + S    L+    + L    +   
Sbjct: 370 NMPRYALVFMVFMMASIGLPGTGGFIGEFLIMMGVFQISTWVALFIATGVILGAAYMLYL 429

Query: 421 SMTKIWNEVFWKDAPAALQQETLARSTLGLYALPILVLTLFSLVIGLAAQPFYQFATLAA 480
               I+ ++  +D    L    L R  + ++A P+LVL L+   +G+    F  F   + 
Sbjct: 430 YRRVIFGKLEKEDLKGLLD---LNRREVAIFA-PLLVLVLW---MGVYPSTFLDFMHTSV 482

Query: 481 EQLLT 485
             L++
Sbjct: 483 ADLVS 487