Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  195 bits (495), Expect = 4e-54
 Identities = 135/444 (30%), Positives = 219/444 (49%), Gaps = 26/444 (5%)

Query: 6   LTLPVVISLLTAVAIFLAGRNRWLTNGLSVICSVINLFTGALLTITIYTHGPASIAFGQW 65
           L L  +I  L AV  +  GR R    G   +   +  F  A+             A G W
Sbjct: 7   LLLLFLIPALGAVVEYPLGRARSALAGAPSVAGALGAFAVAVTMAFRIAESGDLFALGGW 66

Query: 66  PAPFGIVFVADLLSVGMVMVTAIIGLVSVIYAIADL-----SAKPSYAR---YHALLHVL 117
                  F AD LS  + +V   +GL + +++I  L     + + S  R   Y  L  V 
Sbjct: 67  -------FHADALSAVVAIVVTFVGLAATLFSIGYLRHEVEAGQYSQTRLPVYFVLNSVF 119

Query: 118 LAGVYGAFLTGDIFNLYVWFEVMLIASFGLMVLDANQQQIDGAIKYVLLNLISTLVFLLS 177
           +A +    +T ++  +YV  E   +AS  L+         +   KY+LL  +   + LL 
Sbjct: 120 IATMAAVTVTNNVIMMYVVVEATTLASALLVTYYRKPGAWEAGYKYLLLCSVGITMGLLG 179

Query: 178 IGLLYGATGTL-------NLADLHDKAQSLAPEMKTMLAGLLLFAFSIKAALFPLFAWLP 230
             +LY A   L        +++L   A  L P    +   L++  F  KA L P  AWLP
Sbjct: 180 CVILYSAAVPLLGGHRAMQISELATVADQLPPTAVVVGCVLIIIGFGSKAGLIPFHAWLP 239

Query: 231 ASYHTLPSAIVALFAALLTKVGVYALLRVFTLVFPLDGS-GWQPVLLGIAALTMLTGVLG 289
            ++   PS + AL + +  KV +YA+ R+ +L +   G+ G   ++LG  A+TML G++ 
Sbjct: 240 DAHSQSPSPVSALLSGVTLKVAIYAIARIASLFYAGHGALGVFCIVLG--AITMLGGIIA 297

Query: 290 AASQYDIKKILSFHIISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLIGGLIGR 349
           A SQ D+K++L++  +SQ+GY+IMGL I + L   GA++++++H L K  LFL  GL+  
Sbjct: 298 AFSQTDLKRLLAYSSVSQVGYIIMGLGIGSYLGFYGAVYHLMNHALDKAMLFLCTGLLLY 357

Query: 350 KYGTTQLTQLGGVYRAMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKASLAAELYWLAA 409
             GTT + +L G  +  P +   F + A +++G PPL+GFW KF +  A+  A L+W   
Sbjct: 358 SCGTTSIEEL-GKRKHSPLVALCFFIGALAISGVPPLNGFWSKFAIYTAAAEAHLWWALG 416

Query: 410 IALLVGLLTIFSMTKIWNEVFWKD 433
           +ALL  L+TI  + +    +F ++
Sbjct: 417 VALLTSLITIAVLVRAGYLIFLRN 440