Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  178 bits (452), Expect = 5e-49
 Identities = 122/445 (27%), Positives = 219/445 (49%), Gaps = 28/445 (6%)

Query: 18  VAIFLAGRNRWLTNGLSVICSVINLFTGALLTITIYTHGPASIAFGQWPAPFGIV----F 73
           V   LAG  + L   ++++   +       L +T  T GP +   G  P  FG+     F
Sbjct: 19  VLTLLAGNRKSLAGSITLVGVGVACLAMLGLAVTALTVGPIAFDLGTVPL-FGLTSSLAF 77

Query: 74  VADLLSVGMVMVTAIIGLVSVIYAIADLSAKPSY--ARYHALLHVLLAGVYGAFLTGDIF 131
             D LS   V++ +++G  S +Y++  ++  P     RY+    + +AG+     T D F
Sbjct: 78  TIDGLSAIFVILISVLGTASALYSVGYIAHYPDEDARRYYVPFPLFIAGMLMVATTSDWF 137

Query: 132 NLYVWFEVMLIASFGLMVLD-ANQQQIDGAIKYVLLNLISTLVFLLSIGLLYGATGTLNL 190
             +  +E M + S+ L+  +  +++ +     Y  +  ++++  +L+I +L    G+ + 
Sbjct: 138 CFFFGWEFMTLVSYFLVTFENRDKENLSAGFIYFFMTQLTSMGLMLAIIVLGTWGGSTSF 197

Query: 191 ADLHDKAQSLAPEMKTMLAGLL---LFAFSIKAALFPLFAWLPASYHTLPSAIVALFAAL 247
           A +     +L  E    L GLL      F+ KA +FPL  WLP ++   P+++ AL + +
Sbjct: 198 AAVAKTLGALQAENPVALYGLLSLFFIGFATKAGMFPLGIWLPKAHPAAPASVSALLSGV 257

Query: 248 LTKVGVYALLRVFTLVFPLDGSG--WQPVLLGIAALTMLTGVLGAASQYDIKKILSFHII 305
           + K+G+Y +LR+F    PL  +   W  V+     L+ML G L A  ++D K++L+ H I
Sbjct: 258 MIKLGIYGMLRIFLWALPLGEATHVWGMVITLFGVLSMLVGTLRALGEHDCKRLLAQHSI 317

Query: 306 SQIGYMIMGLA----------IYTPLAITGAIFYVIHHILVKGNLFLIGGLIGRKYGTTQ 355
            Q+GY+++GL           ++  L   G ++++I+H   K  LF   G I  + GT  
Sbjct: 318 GQMGYVLLGLGLGLTFLGSNPLFAALGFLGCLYHLINHACFKSLLFFNTGSILYRAGTRD 377

Query: 356 LTQLGGVYRAMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKASL----AAELYWLAA-I 410
           L  LGG+   MP      L+ A S+AG PP +GF  K+L+ ++++    +  +Y LAA +
Sbjct: 378 LDSLGGLSAVMPLTAGCALVGALSIAGTPPFNGFVSKWLLYQSAIFGDVSTPVYILAAVV 437

Query: 411 ALLVGLLTIFSMTKIWNEVFWKDAP 435
           A+ +G +T+ S  K     +    P
Sbjct: 438 AIFIGTVTLASFVKYMGTAYLGTLP 462