Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  164 bits (415), Expect = 7e-45
 Identities = 129/468 (27%), Positives = 224/468 (47%), Gaps = 36/468 (7%)

Query: 31  NGLSVICSVIN---LFTGALLTITIYTHGPASIAFGQWP------APFGIVFVADLLSVG 81
           NG+  + S+I       GA+  I     GP ++  G+ P      A FG+    D LS  
Sbjct: 45  NGVIFLASLIFSGLALAGAIAAILAVFPGPWTLGLGRLPWLASDQALFGLAL--DPLSCL 102

Query: 82  MVMVTAIIGLVSVIYAIADLS-------AKPSYARYHALLHVLLAGVYGAFLTGDIFNLY 134
           M++V  + G + V+Y+   +S       +  + ARY+  + + +  + G   + + F L+
Sbjct: 103 MLVVITLCGFLVVLYSGGYMSLGNVEHPSDANLARYYFFVCLFITAMVGLVSSPNYFQLF 162

Query: 135 VWFEVMLIASFGLMVLDANQQQIDGAIKYVLLNLISTLVFLLSIGLLYGATGTLNLADLH 194
           +++E+  + S+GL+    + + +  A K +L+   + L    ++ L+Y  TG+       
Sbjct: 163 LFWELTTLCSWGLISFYGDAEALKSAYKALLITHGAGLFLAAAVVLIYVETGSFAF---- 218

Query: 195 DKAQSLAPEMKTMLAGLLLFAFSIKAALFPLFAWLPASYHTLPSAIVALFAALLTKVGVY 254
           D    L P +K+++   +  A   KAA FP F WLP +      A   L AA + K G+Y
Sbjct: 219 DAINLLTPGLKSLVIAFMGIAALAKAAQFPFFTWLPTAMAAPTPASSYLHAAAMVKAGIY 278

Query: 255 ALLRVFTLV--FPLDGSGWQPVLLGIAALTMLTGVLGAASQYDIKKILSFHIISQIGYMI 312
            L R+   V  FP +       L  IA +TM   V+    Q D+K++L+F  I+ +GYM+
Sbjct: 279 LLARLALSVDAFPPELG---LALSVIAIVTMCLAVVLYFPQDDLKRLLAFSTIANLGYMV 335

Query: 313 MGLAIY---TPLAITGAIFYVIHHILVKGNLFLIGGLIGRKYGTTQLTQLGGVYRAMPWL 369
           +G+A+    +  A+ G + +++ H   K  LFL  G I    GT ++  L G+ R MP  
Sbjct: 336 LGIAMGAMGSRTALEGGMLHLVGHSFTKSLLFLAVGAISYATGTRKIGLLSGLGRKMPVT 395

Query: 370 TFGFLLAAFSLAGFPPLSGFWGKFLVIKASLAAELYW---LAAIALLVGLLTIFSMTKIW 426
              F+L A +++G PP + FW K+L++  ++     W   LA + L   +        I 
Sbjct: 396 ALAFVLGAMAISGMPPFNMFWSKYLIVSGAIELSSTWGWTLAVLTLAESVAGFAWFLHIV 455

Query: 427 NEVFWKDAPAALQQETLARSTLGLYALPILVLTLFSLVIGLAAQPFYQ 474
           ++VF+   P +   E  AR       +P++VL  FS++  + A P  Q
Sbjct: 456 HKVFF--GPVSPTAEN-ARDPGAAMLIPLIVLMAFSVLSTVFALPMIQ 500