Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., NADH-quinone oxidoreductase subunit M from Rhodopseudomonas palustris CGA009

 Score =  147 bits (371), Expect = 8e-40
 Identities = 135/488 (27%), Positives = 221/488 (45%), Gaps = 42/488 (8%)

Query: 18  VAIFLAG---RNRWLTNGLSVICSVINLFTGALLTITIYTHGPASIAFGQ----WPAPFG 70
           VA F+AG   R RW+T     +  V        L + +   G     + +    W   FG
Sbjct: 16  VAFFVAGKGERERWVTIATFALMLV--------LLVAVVATGAEGRWYDKVSYPWVPSFG 67

Query: 71  IV--FVADLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYHALLHVLLAGVYGAFLTG 128
           I   F  D LS  M+ + A +G++SV+ + +++  +     +HA L   +A   G FL+ 
Sbjct: 68  ISLDFAIDGLSATMIALAAGLGIISVMASWSEIRTQSGL--FHASLCWTVAATVGVFLSF 125

Query: 129 DIFNLYVWFEVMLIASFGLMVLDANQQQIDGAIKYVLLNLISTLVFLLSIGLLYGATGTL 188
           D+     ++E ML+ +F L+ +  +  +   A+K+++ N ++        GLL  +    
Sbjct: 126 DLLIFAFFWEAMLVPAFTLIAVWGHGDKEGAALKFLIFNAVA------GFGLLAASFALA 179

Query: 189 NLADLHDKAQSLAPEMKT-------MLAGLLLFAFSIKAALFPLFAWLPASYHTLPSAIV 241
            +AD    +     EMK        ML G  L AF +K ++ P  AWLP ++   P+A  
Sbjct: 180 AMADHMTFSAFELAEMKLSTPVQVWMLLGFSL-AFMVKLSVPPFHAWLPEAHTLAPTAGS 238

Query: 242 ALFAALLTKVGVYALLRVFTLVFPLDGSGWQPVLLGIAALTMLTGVLGAASQYDIKKILS 301
            L A LL K G Y L R   ++FP   +   P  + + A   L G L A  Q D K++++
Sbjct: 239 ILLAGLLLKTGAYGLFRFAPMLFPDGLAAVAPYGIALGAAGALYGGLVACGQNDAKRLVA 298

Query: 302 FHIISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLIGGLIGRKYGTTQLTQLGG 361
           +  I+ +  ++MG++     A+ GA   +I H      LFL+ G +  +  T  L QLGG
Sbjct: 299 YTSIAHMSIVLMGISAGVHYALAGAAVEMIAHSFSASALFLLIGALYERTHTRDLRQLGG 358

Query: 362 VYRAMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKASLAAELYWLAAIALLVGLL--TI 419
           + +  P     F L   +L   P  + F G+ LV+      ++ W+ A+  L  L+   I
Sbjct: 359 LQQTAPKFAAAFALFCSALLALPGTANFVGEALVVVGIF--QVNWVFALLALSTLVVSVI 416

Query: 420 FSMTKIWNEVFWKDAPAALQQETLARSTLGLYALPILVLTLFSLVIGLAAQPFYQFATLA 479
           ++   +   VF    P    +  LA  T   Y  PILV+ + +L+IGL  Q        A
Sbjct: 417 YATRLLKGLVFGLPQP----KPPLADMTWREY-WPILVMGIGTLIIGLYPQSLLALLEPA 471

Query: 480 AEQLLTPT 487
            +  LT T
Sbjct: 472 IKAALTQT 479