Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., NADH-quinone oxidoreductase subunit NuoN from Rhodopseudomonas palustris CGA009

 Score =  150 bits (379), Expect = 1e-40
 Identities = 128/489 (26%), Positives = 223/489 (45%), Gaps = 37/489 (7%)

Query: 8   LPVVISLLTAVAIFLAGRNRW--LTNGLSVICSVINLFTGALLTITIYTHGPASIAFGQW 65
           LP ++ ++ A+ + + G  R    T  ++V+  ++ L TGAL    +    PA       
Sbjct: 14  LPELVLVVGAMLLLMLGAYRGPKATGTVTVLAILLLLATGALELFAL----PAGKL---- 65

Query: 66  PAPFGIVFVADLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYHALLHVLL--AGVYG 123
              FG  F+ D  +   + V A+IG    +    ++   PS   +   + VLL  AG+  
Sbjct: 66  -VTFGGSFIVDDFA-RFLKVLALIGSAVTLILSLEVLTDPSRRMFEYAILVLLSSAGMLL 123

Query: 124 AFLTGDIFNLYVWFEVMLIASFGLMVLDANQQQI---DGAIKYVLLNLISTLVFLLSIGL 180
               GD+  LY+  E+M +A +  +V  +N+Q     +  +KY +L  +S+ + L    L
Sbjct: 124 LISAGDLIMLYLGLELMSLALY--VVAASNRQDAKSNEAGMKYFVLGALSSGMLLYGASL 181

Query: 181 LYGATGTLNLADLHDKAQS----LAPEMKTMLAGLLLFAFSIKAALFPLFAWLPASYHTL 236
           +YG TGT+  + +   A+     L   +  +LAGL       K +  P   W P  Y   
Sbjct: 182 IYGFTGTVQFSGIAAAAKDGNVGLVFGLVFLLAGLCF-----KVSAVPFHMWTPDVYEGA 236

Query: 237 PSAIVALFAALLTKVGVYALLRVFTLVFPLDGSGWQPVLLGIAALTMLTGVLGAASQYDI 296
           P+ + A FA+     G+    RV    FP     WQ +++ +A  +M  G   A  Q +I
Sbjct: 237 PTPVTAFFASAPKVAGIAIFTRVTLTAFPSIAPQWQQIVIFVAIASMALGSFAAIGQKNI 296

Query: 297 KKILSFHIISQIGYMIMGLAIYTPLAITGAIFYV-IHHILVKGNLFLIGGLIGRKYGTTQ 355
           K+++++  I+ IG+ ++GL+  T     G I Y+ I+  +  G   +I  +         
Sbjct: 297 KRLMAYSAIANIGFALVGLSAGTVEGAQGVIVYISIYVAMTLGAFAVILAMRRNGMHVEN 356

Query: 356 LTQLGGVYRAMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKASLAAELYWLAAIALLVG 415
           ++   G+ R  P L F F +  FS AG PPL+GF+ KF V  A++ A ++ LA I ++  
Sbjct: 357 ISDFAGLSRTNPPLAFFFAMLLFSFAGIPPLAGFFAKFYVFMAAIKAGMFVLAVIGVVTS 416

Query: 416 LLTIFSMTKIWNEVFWKD-APAALQQETLARSTLGLYALPILVLTLFSLVIGLAAQPFYQ 474
           ++  +    I   +++ + AP         R  L       +V  LF+++  +   P   
Sbjct: 417 VVGAYYYLAIVKVMYFDEPAPGVDPVRPELRGVL-------MVAGLFNMLFFVYPAPLVN 469

Query: 475 FATLAAEQL 483
            AT AA+ L
Sbjct: 470 AATAAAKSL 478