Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., monovalent cation/H+ antiporter subunit D from Rhodopseudomonas palustris CGA009

 Score =  231 bits (589), Expect = 5e-65
 Identities = 170/536 (31%), Positives = 274/536 (51%), Gaps = 60/536 (11%)

Query: 6   LTLPVVISLLTAVAIFLAGRNRWLTNGLSVICSVINLFTGALLT-----ITIYTHGPASI 60
           + LP+++ L     + L           + + S++ +   ALL      +T  T G A I
Sbjct: 9   IILPILLPLFVGAVMLLIDERYQQIKAFANLASIVMMGIIALLLMRAADVTTAT-GTAPI 67

Query: 61  A---FGQWPAPFGIVFVADLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYHALLHVL 117
           A    G WPAPF IV VAD LS  M+ +T+++   S I+A A        A +H+L+  L
Sbjct: 68  AVYRLGDWPAPFAIVLVADRLSALMLALTSVLAFASTIFATARWHRVG--AHFHSLMQFL 125

Query: 118 LAGVYGAFLTGDIFNLYVWFEVMLIASFGLMVLDANQQQIDGAIKYVLLNLISTLVFLLS 177
           L G+ GAFLTGD+FNL+V+FE++L AS+GL++  + Q ++   ++Y+ +NL ++++FL+ 
Sbjct: 126 LMGLNGAFLTGDLFNLFVFFELLLAASYGLVLHGSGQARVRAGLQYIAINLTASVLFLIG 185

Query: 178 IGLLYGATGTLNLADLHDKAQSLAPEMKTML---AGLLLFAFSIKAALFPLFAWLPASYH 234
           + L+Y  TGTLN+ADL  +   +  + + +L   A +L  AF +KA ++PL  WLP +Y 
Sbjct: 186 VSLIYAVTGTLNMADLAIRIPQVPTQDRALLEAGAAILGVAFMVKAGMWPLCFWLPTTYA 245

Query: 235 TLPSAIVALFAALLTKVGVYALLRVFTLVF-------PLDGSGWQPVLLGIAALTMLTGV 287
              + + A+F A+++KVG+Y LLR+  L F        L GS W  V  GIA  T+L G+
Sbjct: 246 AAAAPVAAIF-AIMSKVGIYILLRLSLLFFGAGSGASALFGSEWL-VAAGIA--TILFGL 301

Query: 288 LGAASQYDIKKILSFHIISQIGYMIMGLAIYTPLAIT-GAIFYVIHHILVKGNLFLIGGL 346
           +GA +  +I ++  + ++   G ++   A     A+T  A+FY++   L     F++  L
Sbjct: 302 IGALASQEISRLAGYAVLVSSGTVLAVAAAAGTAAVTASALFYLVSSTLAIAAFFMLIEL 361

Query: 347 I--GRKYGTTQLTQLGGVY------------------RAMPWLTFGFLLAAFSLAGFPPL 386
           +  GR  G   L      Y                   +M  L + F+  A  +AG PP+
Sbjct: 362 LERGRDPGADMLAVTREAYGEDMPDDPDAEEVGMVIPASMAILGWCFVGCAAVIAGLPPV 421

Query: 387 SGFWGKFLVIKASLAAE-------LYW-LAAIALLVGLLTIFSMTKIWNEVFWKDAPAAL 438
           SGF  KF ++ A L+ +       L+W L A+ +L GL  + +MT+      W     A 
Sbjct: 422 SGFIAKFSMLTALLSGDTGSSITPLHWTLLALLMLSGLTMLIAMTRAGIRTLWSPTERAD 481

Query: 439 QQETLARSTLGLYALPILVLTLFSLVIGLAAQPFYQFATLAAEQLLTPTAYIHAVL 494
            +  LA        +PI +L L    + +  Q    +   AA+ L TP AYI +VL
Sbjct: 482 PRIRLAE------IVPIALLLLGCAAMTVQPQAAMTYMQGAAKSLHTPAAYIDSVL 531