Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., Probable NADH dehydrogenase I (chain N) NuoN (NADH-ubiquinone oxidoreductase chain N) from Mycobacterium tuberculosis H37Rv

 Score =  146 bits (368), Expect = 2e-39
 Identities = 108/373 (28%), Positives = 183/373 (49%), Gaps = 27/373 (7%)

Query: 127 TGDIFNLYVWFEVMLIASFGLMVLDANQQQI--DGAIKYVLLNLISTLVFLLSIGLLYGA 184
           + D+  ++V  EV+ +  + +  L  N++ +  + A+KY LL   S+  FL  + LLYGA
Sbjct: 169 SNDLLTMFVALEVLSLPLYLMCGLARNRRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGA 228

Query: 185 TGTLNLADLHDKAQSLAPEMKTMLAGLLLFAFSI--KAALFPLFAWLPASYHTLPSAIVA 242
           TGTL L  + D A +   +    LAG+ L A  +  K    P  +W+P  Y   P+ I  
Sbjct: 229 TGTLTLPGIRD-ALAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITG 287

Query: 243 LFAALLTKVGVY-ALLRVFTLVFPLDGSGWQPVLLGIAALTMLTGVLGAASQYDIKKILS 301
             AA  TKV  + ALLRV  +  P     W+PVL  IA LTM  G + A +Q ++K++L+
Sbjct: 288 FMAAA-TKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLA 346

Query: 302 FHIISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLIGGLIGRKYGT-----TQL 356
           +  ++ +G+++ G+    P  ++  +FY++ +       F I GL+    G+       L
Sbjct: 347 YSSVAHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADL 406

Query: 357 TQLGGVYRAMPWLTFGFLLAAFSL--AGFPPLSGFWGKFLVIKASLAAELYWLAAIALLV 414
           +   G+ +  P    G +L+ F L  AG P  SGF  KF V +A+ +A    L  + ++ 
Sbjct: 407 SHWAGLGQRSP--IVGVMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVIS 464

Query: 415 GLLTIFSMTKIWNEVFWK----DAPAALQQETLARSTLGLYALPILVLTLFSLVIGLAAQ 470
             +  +   ++   +F+     D P       L+++        I V T+ ++V+G+A Q
Sbjct: 465 SGVAAYFYVRVIVSMFFTEESGDTPHVAAPGVLSKAA-------IAVCTVVTVVLGIAPQ 517

Query: 471 PFYQFATLAAEQL 483
           P    A  AA+ L
Sbjct: 518 PVLDLADQAAQLL 530



 Score = 25.4 bits (54), Expect = 0.005
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 6/79 (7%)

Query: 201 APEMKTMLAGLLLFAFSIKAALFPLFAWLPASYHTLPSAIVALFAALLTKVGVYALLRVF 260
           AP ++  L   +L  FS+  A     A+LP  +       +AL  + +      AL+ V 
Sbjct: 5   APHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAV------ALIAVI 58

Query: 261 TLVFPLDGSGWQPVLLGIA 279
            +   + GSG   VL  IA
Sbjct: 59  VVARSIHGSGHAAVLGAIA 77