Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., energy conserving hydrogenase EhbF from Methanococcus maripaludis S2

 Score =  187 bits (476), Expect = 5e-52
 Identities = 145/487 (29%), Positives = 248/487 (50%), Gaps = 35/487 (7%)

Query: 8   LPVVISLLTAVAI---FLAGRNRWLTNGLSVICSVINLFTGALLTITIYTHGPASIAFGQ 64
           LP+++     VAI   +L G+++ L   +++I +++ L    + +  IY  G   I  G 
Sbjct: 4   LPLIVVFPMFVAIIFNYLNGKDK-LIRPMTLIMAILLLALPFIGSYGIYNFGAHGIENGL 62

Query: 65  WPAPFGIVFVADLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYHALLHVLLAGVYGA 124
                 I  ++ L +    ++  +I L+  +  I  L  K S   + AL+ + LA V   
Sbjct: 63  ------ISGISYLYTPVKQLIITVIMLIGSLVLITGLGEKKSSGLFVALMLMGLASVSAV 116

Query: 125 FLTGDIFNLYVWFEVMLIASFGLMVLDANQQQIDGAIKYVLLNLISTLVFLLSIGLLYGA 184
            +  D+FN+YV++E+  IA  GL++    ++    A +Y++L   +  + LL + +L  A
Sbjct: 117 VMADDLFNIYVFYEIAAIAQTGLVIASGTEKAYRSAFRYLILGNFAGSILLLGVSMLLAA 176

Query: 185 TGTLNLADLHDKAQSLAPEMKTMLAGLLLFAFSIKAALFPLFAWLPASYHTLPSAIVAL- 243
           TGTLN+ D+H+   +  P   T+  GLL+    +        + LP  +HT+ + I A  
Sbjct: 177 TGTLNITDMHNFLLN-NPATPTIYGGLLMLIIGLCYG-----SGLP-PFHTVKADIYARA 229

Query: 244 ---FAALLTKVGVYALLRVFTLVFPLDG-----SGWQPVLLGIAALTMLTGVLGAASQYD 295
               AA+L     + L+ +  ++F L G     +    VL+G++ L M+ GV+ A  Q D
Sbjct: 230 KPHVAAMLQTYSKFVLVALLLVIFKLFGGLSYFASAHGVLIGLSVLGMVFGVVMALLQTD 289

Query: 296 IKKILSFHIISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLIGGLIGRKYGTTQ 355
            KK+L++H ISQ GY+  G+A+ TPL I   IF+ I+H++ K  LFL G  I  +     
Sbjct: 290 YKKLLAYHAISQGGYVAAGIALGTPLGIVAGIFHAINHVIYKSALFL-GAHIVERRKEGN 348

Query: 356 LTQLGGVYRAMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKASLAAELYWLAAIALLVG 415
           L +LGG+   +P   F  L A  +++G PP +GF  K L+ +A++   +  LA I +LV 
Sbjct: 349 LNKLGGLLPVIPATAFMVLCAKLAISGVPPFNGFQSKLLLAEAAMNVNMPELAIIMILVS 408

Query: 416 LLTIFSMTKIWNEVFWKDAPAALQQ-ETLARSTLGLYAL-PILVLTLFSLVIG----LAA 469
           + T  SM K +  ++ K  P + +Q E   ++    YA+  + VLT   +++G    LA 
Sbjct: 409 IGTFVSMMKAFYLIYLK--PCSQEQLEEYKKAKPSKYAVFSLAVLTFLCILLGIFPNLAT 466

Query: 470 QPFYQFA 476
              Y FA
Sbjct: 467 DIIYPFA 473