Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., NADH dehydrogenase I, M subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  145 bits (367), Expect = 3e-39
 Identities = 115/439 (26%), Positives = 216/439 (49%), Gaps = 26/439 (5%)

Query: 56  GPASIAFGQWPAP----FGIVF--VADLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYAR 109
           G AS    +W  P    FGI      D LS+ MV++T  IG+++++ +  ++  +  +  
Sbjct: 66  GAASAWAAEWRLPWIPRFGISLHLAVDGLSLLMVILTCFIGVLAILCSWKEIVQRIGF-- 123

Query: 110 YHALLHVLLAGVYGAFLTGDIFNLYVWFEVMLIASFGLMVLDAN-----QQQIDGAIKYV 164
           +H  L  +L GV G F+  D+F  + ++E+ML+  + L+ L  +     + +I+ A K+ 
Sbjct: 124 FHLNLLWILGGVLGVFMALDLFLFFFFWEMMLVPMYFLIALWGHSVTDGKSRINAATKFF 183

Query: 165 LLNLISTLVFLLSI-GLLYG---ATG--TLNLADLHDKAQSLAPEMKTMLAGLLLFAFSI 218
           +   +S L+ L++I GL+     ATG  T N  DL +   S + E   ML      AF++
Sbjct: 184 IYTQVSGLIMLVAIIGLVLTHQHATGVYTFNYLDLLNTPMSNSVEWLLMLG--FFIAFAV 241

Query: 219 KAALFPLFAWLPASYHTLPSAIVALFAALLTKVGVYALLRVFTLVFPLDGSGWQPVLLGI 278
           K  L PL  WLP ++   P+A     A +L K   Y LLR    +FP   + + P  + +
Sbjct: 242 KMPLVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFALPLFPEASAEFAPYAMVL 301

Query: 279 AALTMLTGVLGAASQYDIKKILSFHIISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKG 338
             + ++ G + A  Q DIK+++++  IS +G++++ +   + +A+ GA+  +I H L   
Sbjct: 302 GLIGIIYGAIVAFGQTDIKRLVAYTSISHMGFVMIAIYSGSEVALQGAVVQMIAHGLSAA 361

Query: 339 NLFLIGGLIGRKYGTTQLTQLGGVYRAMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKA 398
            LF++ G +  +  T  L Q+GG++  + +L    L  + +  G P    F G+FL++  
Sbjct: 362 GLFILCGQLYERLHTRDLRQMGGLWGRLRYLPGVMLFFSVASLGMPGTGNFVGEFLILVG 421

Query: 399 SLAAELYWLAAIALLVGLLTIFSMTKIWNEVFWKDAPAALQQETLARSTLGLYALPILVL 458
           S        A     + L +++S+  +    F    PA  + +++ +         ++V+
Sbjct: 422 SFQVAPVITAVATFGLVLASVYSLIMLQRACF---GPA--KDDSVLKGLDRRELTMMMVI 476

Query: 459 TLFSLVIGLAAQPFYQFAT 477
               +++GL  QP    A+
Sbjct: 477 AGLLVLLGLYPQPVIDTAS 495