Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 1253 a.a., hydrogenase, CooM subunit, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  152 bits (384), Expect = 7e-41
 Identities = 98/402 (24%), Positives = 189/402 (47%), Gaps = 14/402 (3%)

Query: 76   DLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYHALLHVLLAGVYGAFLTGDIFNLYV 135
            D+LS G V+  A+IG ++++YA+  +    +  R++     ++ G+ G   + D+++ + 
Sbjct: 751  DMLSYGFVLTVAVIGCLNMVYAVGYMEHSHTQWRFYTFFLFMVGGLMGVAASRDLYSFFT 810

Query: 136  WFEVMLIAS-FGLMVLDANQQQIDGAIKYVLLNLISTLVFLLSIGLLYGATGTLNLADLH 194
            ++E+M   S + ++V +   + +    KY   N++      L + LL    G+     +H
Sbjct: 811  FWEIMSSWSLYCVIVHEEFPEALREGFKYFFFNVLGAAFMFLGVVLLTAGAGSPAFDAVH 870

Query: 195  DKAQSLAPEMKTMLAGLLLFAFSIKAALFPLFAWLPASYHTLPSAIVALFAALLTKVGVY 254
                S+   +     GL++    +KAA  P    +     T P+ +    +++L K  ++
Sbjct: 871  AALPSMPVGLSATAVGLMVLGLVMKAAQLPFRIDVQMHPATAPTPVSGYISSVLLKSALF 930

Query: 255  ALLRVFTLVFP----------LDGSGWQPVLLGIAALTMLTGVLGAASQYDIKKILSFHI 304
             L ++   +             DG G   V+  +  +T++   L A  Q D+K +L +  
Sbjct: 931  GLAKLLLALGGGAVLVQAAGFTDGIGLMQVVAWVGGITIVMAALLAVLQSDLKLVLIYST 990

Query: 305  ISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLIGGLIGRKYGTTQLTQLGGVYR 364
            +SQ+GYM++  A+ TPL + G + ++ +H+L K  LFL+ G +  +     L QLGG+ R
Sbjct: 991  VSQLGYMVLAFALGTPLGMAGGLLHLANHVLFKDLLFLVAGALILQTHKHSLDQLGGIGR 1050

Query: 365  AMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKASLAAELYWLAAIALLVGLLTIFSMTK 424
             MP     F + A S+ G PP +GF  K+++  A +      LA ++L+  +LT+    K
Sbjct: 1051 KMPVTLGVFAIGALSVVGVPPTNGFTSKWIIYHALMQQGEVMLAILSLVGSVLTLAYFAK 1110

Query: 425  IWNEVFWKDAPAALQQETLARSTLGLYALPILVLTLFSLVIG 466
              +  F       +     A   +    +P+LVL    +V G
Sbjct: 1111 YLHAAFLGQPSPDIDHVQEAPRVM---LVPMLVLAAGCVVTG 1149



 Score =  143 bits (360), Expect = 4e-38
 Identities = 109/421 (25%), Positives = 196/421 (46%), Gaps = 20/421 (4%)

Query: 76  DLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYHALLHVLLAGVYGAFLTGDIFNLYV 135
           D L+    ++T  + L    Y++  ++     + Y+  L ++   + G   T    + Y 
Sbjct: 275 DPLARLFAVITGGVCLAVTAYSVGYITHARHSSGYYFFLMIMTGSLMGLVSTRSFGSFYG 334

Query: 136 WFEVMLIASFGLMVLDANQQQIDGAIKYVLLNLISTLVFLLSIGLLYGATGTLNLADLHD 195
           ++E+M  +S+ L+V +   +     +KY ++     +  L  + +L    G+ +   +  
Sbjct: 335 FWELMTWSSYFLVVHEGTPRAFRAGVKYFVMCAAGAMFMLPGLLMLTNG-GSADFDAVTT 393

Query: 196 KAQSLAPEMKTMLAGLLLFAFSIKAALFPLFAWLPASYHTLPSAIVALFAALLTKVGVYA 255
             + L P +      L L  F++KA   P+  WLP ++   PS+I    + LLTK G+Y 
Sbjct: 394 AVRQLDPMLLKAALLLTLAGFAVKAGFVPVHGWLPDAHPVAPSSISGPLSGLLTKTGIYG 453

Query: 256 LLRVFTLVFPLD----------GSGWQ-PVLLGIAALTMLTGVLGAASQYDIKKILSFHI 304
           ++RV   +  +           G  W    +  +  LTM  G + A  Q DIK++L++  
Sbjct: 454 IVRVLFAICGMTVLLQTGEGIAGISWMGAAVTTLGVLTMAYGEVMALRQDDIKRLLAYST 513

Query: 305 ISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLIGGLIGRKYGTTQLTQLGGVYR 364
           + QIG +   + + T L+ TGA+ +V++H ++K  LFL  G +  + G  +L  L G+ R
Sbjct: 514 MGQIGEIATIIGLGTWLSTTGALAHVLNHAIMKNLLFLCAGALVMRAG-RKLEDLAGMGR 572

Query: 365 AMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKASLAAELYWLAAIALLVGLL-TIFSMT 423
            MPW     ++   S+ G PP +GF  K+L+++ ++ A    LAA  LL  L   ++ M 
Sbjct: 573 MMPWTAGCMMVGVLSIMGMPPFAGFASKYLMLQGAVQAGHPELAAALLLASLAGAVYYMR 632

Query: 424 KIWNEVFWKDAPAALQQETLARSTLGLYALPILVLTLFSLVIGLAAQPFYQFATLAAEQL 483
            I   VF       +Q+   A        LP+LVL    + +G+A Q      T  A+ L
Sbjct: 633 IIRVLVFMPRKGHPVQEAPWA------MRLPMLVLAGLCVFLGIAPQYGLALVTPVADML 686

Query: 484 L 484
           +
Sbjct: 687 V 687