Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., NADH-quinone oxidoreductase chain M from Caulobacter crescentus NA1000

 Score =  146 bits (368), Expect = 2e-39
 Identities = 119/490 (24%), Positives = 221/490 (45%), Gaps = 17/490 (3%)

Query: 5   GLTLPVVISLLTAVAIFLAGR--------NRWLTNGLSVICSVINLFTGALLTITIYTHG 56
           GL      + L  VA+ LA R           L   ++++ +++      +LT+      
Sbjct: 9   GLLSLTTFAPLAGVAVILAARALHGAGEKTDTLAKWIALVTTLVTFGLSIVLTVQFDPKN 68

Query: 57  PAS--IAFGQWPAPFGIVFVADLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYHALL 114
           P    +    W A        D +SV  V++TA   L+ +    +  S +     Y    
Sbjct: 69  PGFQFVEDIAWFAGLHYRMGVDGISVLFVLLTAF--LLPICIVASWKSVEKRVVEYLIAF 126

Query: 115 HVLLAGVYGAFLTGDIFNLYVWFEVMLIASFGLMVLDANQQQIDGAIKYVLLNLISTLVF 174
            VL   V G F   DI   Y++FE  L+  F ++ +   +++I  A K+ L  L+ +++ 
Sbjct: 127 LVLETLVIGVFCALDIVLFYLFFEGGLVPMFLIIGIWGGKRRIYAAYKFFLYTLLGSVLM 186

Query: 175 LLSIGLLYGATGTLNLADLHDKAQSLAPEMKTMLAGLLLFAFSIKAALFPLFAWLPASYH 234
           L +I  + G +GT ++ +L       AP ++T L      +F++K  ++P+  WLP ++ 
Sbjct: 187 LAAILAMIGISGTSSIPEL--MTFKFAPWLQTWLWLAFFASFAVKMPMWPVHTWLPDAHV 244

Query: 235 TLPSAIVALFAALLTKVGVYALLRVFTLVFPLDGSGWQPVLLGIAALTMLTGVLGAASQY 294
             P+A   + A +L K+G Y  +R    +FP     +QP++  ++A+ ++   L A  Q 
Sbjct: 245 EAPTAGSVILAGILLKMGGYGFMRFSLPMFPNASEMFQPLVFALSAIAIVYTSLVAFRQT 304

Query: 295 DIKKILSFHIISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLIGGLIGRKYGTT 354
           DIKK++++  ++ +G++ MG+         GA+F ++ H ++ G LFL  G++  +  T 
Sbjct: 305 DIKKLIAYSSVAHMGFVTMGIFSGNAAGEQGALFQMLSHGIISGALFLCVGVVYDRMHTR 364

Query: 355 QLTQLGGVYRAMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKASLAAELYWLAAIALLV 414
           ++   GG+   MP     F+L      G P  SGF G+ L +     A  +     AL V
Sbjct: 365 EIAFYGGLTNRMPMYAAVFMLFTMGNVGLPGTSGFVGEILTMTGVYKASTWTAIVSALGV 424

Query: 415 GLLTIFSMTKIWNEVFWKDAPAALQQETLARSTLGLYALPILVLTLFSLVIGLAAQPFYQ 474
            L  ++++T     +F +     L   T       L   P++V T   LV+G+     + 
Sbjct: 425 ILSAMYALTLYRRVMFGEITNPQLATITDLDKREILIFAPLIVST---LVLGIYPNLVFN 481

Query: 475 FATLAAEQLL 484
               + + L+
Sbjct: 482 LTATSVDALV 491