Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., NADH dehydrogenase I, chain L (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  142 bits (358), Expect = 4e-38
 Identities = 102/382 (26%), Positives = 186/382 (48%), Gaps = 24/382 (6%)

Query: 69  FGIVFVADLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYHALLHVLLAGVYGAFLTG 128
           F +  + D +SV M++V + + L+  IY+   +  +  + RY+A L +    + G  +  
Sbjct: 82  FDLGILLDPISVMMLIVISTVSLMVHIYSFGYMKGETGFQRYYAFLSLFTMSMLGLVVAT 141

Query: 129 DIFNLYVWFEVMLIASFGLM-VLDANQQQIDGAIKYVLLNLISTLVFLLSIGLLYGATG- 186
           +IF +Y+++E++ ++S+ L+         I  + K  ++   + L FL+ I L+YG  G 
Sbjct: 142 NIFQMYLFWELVGVSSYLLIGFYYTKPAAIAASKKAFIVTRFADLGFLIGI-LIYGYYGG 200

Query: 187 ----TLNLADLHDKAQSLAPEMKTMLAGLLLFAFSIKAALFPLFAWLPASYHTLPSAIVA 242
               T +   L     S+ P    +  GL+    + K+A+FPL  WLP +          
Sbjct: 201 TFGFTPDTVSLISGGASMLP----LALGLMFIGGAGKSAMFPLHIWLPDAMEGPTPVSAL 256

Query: 243 LFAALLTKVGVYALLRVFTLVFPLDGSGWQPVLLGIAALTMLTGVLGAASQYDIKKILSF 302
           + AA +   GVY + R+F L F         ++  + A T       A  Q DIK++L+F
Sbjct: 257 IHAATMVVAGVYLVARMFPL-FIAYAPDTLHMIAWVGAFTAFYAASVACVQSDIKRVLAF 315

Query: 303 HIISQIGYMIMGLAIYTP-------LAITGAIFYVIHHILVKGNLFLIGGLIGRKYGTTQ 355
             ISQIG+M++ L + T        L    ++F++  H + K  LFL  G I     + +
Sbjct: 316 STISQIGFMMVALGVCTSMDPHHGGLGYMASMFHLFTHAMFKALLFLGAGSIIHAVHSNE 375

Query: 356 LTQLGGVYRAMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKA--SLAAELYWLAAIALL 413
           ++ +GG+ + MP   + FL+A  ++AG PP SGF+ K  ++ A    +  + W+  +   
Sbjct: 376 MSAMGGLRKYMPITHWTFLIACLAIAGIPPFSGFFSKDEILAACFQYSPAMGWVMTV--- 432

Query: 414 VGLLTIFSMTKIWNEVFWKDAP 435
           +  +T F M +++  +FW   P
Sbjct: 433 IAAMTAFYMFRLYYGIFWGAEP 454