Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., NADH dehydrogenase I, chain M (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  130 bits (326), Expect = 1e-34
 Identities = 104/414 (25%), Positives = 192/414 (46%), Gaps = 34/414 (8%)

Query: 6   LTLPVVISLLTAVAIFLAGRNRWLTNGLSVICSVINLFTGALLTITIY----------TH 55
           L++ V+I LL      LAG   W   G+  I  V+     ALL  ++             
Sbjct: 4   LSIFVLIPLL-----MLAGL--WAARGIKAIRGVMVTGASALLIASVVLTFMYLGERSAG 56

Query: 56  GPASIAFGQ---WPAPFGIVFVA--DLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARY 110
             A + F     W AP  I +    D +SV M++++A+I         A    +P    Y
Sbjct: 57  NTAEMLFRADTLWYAPLHISYSVGVDGISVAMLLLSAVIVFTGTF---ASWRLQPLTKEY 113

Query: 111 HALLHVLLAGVYGAFLTGDIFNLYVWFEVMLIASFGLMVLDANQQQIDGAIKYVLLNLIS 170
                +L  GV+G F++ D+F +++++E+ LI  + L+ +  + ++   A+K  L+ +  
Sbjct: 114 FLWFTLLSMGVFGFFISIDLFTMFMFYEIALIPMYLLIGVWGSGRKEYAAMKLTLMLMGG 173

Query: 171 TLVFLLSI-GLLYGATGT----LNLADLHDKAQSLAPEMKTMLAGLLLFAFSIKAALFPL 225
           +   L+ I G+ +G+  T    L +A LH+    +    + +   L    F +  ALFP 
Sbjct: 174 SAFLLIGILGIYFGSGATTMNLLEIAQLHN----IPFAQQCIWFPLTFLGFGVLGALFPF 229

Query: 226 FAWLPASYHTLPSAIVALFAALLTKVGVYALLRVFTLVFPLDGSGWQPVLLGIAALTMLT 285
             W P  + + P+A+  L A +L K+G Y   R+   + P   +    + L +  ++++ 
Sbjct: 230 HTWSPDGHASAPTAVSMLHAGVLMKLGGYGCFRIAMYLMPEAANELSWIFLILTGISVVY 289

Query: 286 GVLGAASQYDIKKILSFHIISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLIGG 345
           G   A  Q D+K I ++  +S  G ++  + +    A TGAI  ++ H L+    F + G
Sbjct: 290 GAFSACVQTDLKYINAYSSVSHCGLVLFAILMLNQTAATGAILQMLSHGLMTALFFALIG 349

Query: 346 LIGRKYGTTQLTQLGGVYRAMPWLTFGFLLAAFSLAGFPPLSGFWGKFLVIKAS 399
           +I  +  T  + +L G+ + MP+L+  +++A  +  G P LSGF  +  +   S
Sbjct: 350 MIYGRTHTRDVRELTGLMKVMPFLSVCYVIAGLANLGLPGLSGFIAEMTIFVGS 403