Pairwise Alignments

Query, 168 a.a., peptide deformylase from Vibrio cholerae E7946 ATCC 55056

Subject, 170 a.a., peptide deformylase (RefSeq) from Shewanella loihica PV-4

 Score =  146 bits (368), Expect = 2e-40
 Identities = 74/169 (43%), Positives = 112/169 (66%), Gaps = 2/169 (1%)

Query: 1   MAVLEILTAPDPRLRVQSKQVTDV-ASVQTLIDDLLDTLYATDNGIGLAAPQVGREEAIV 59
           M++L++L  PD RLR  +K +T+  A +QT ID++ +T+Y  + GIGLAA QV     ++
Sbjct: 1   MSLLKVLRFPDERLRTIAKPITEFNAELQTQIDNMFETMYE-EKGIGLAATQVDYHHQLI 59

Query: 60  VIDLSDNRDQPLVLINPKVVSGSNKEMGQEGCLSVPDYYADVERYTSVVVEALDREGKPL 119
           V+DL D+ ++P V IN +++  S     +EGCLSVP  YA V+R   V ++ALDR+G   
Sbjct: 60  VMDLQDDVERPKVFINLEIIEKSGDFCNEEGCLSVPGIYAKVDRAEFVTIKALDRDGNEF 119

Query: 120 RIETSDFLAIVMQHEIDHLSGNLFIDYLSPLKQQMAMKKVKKHVKNRAR 168
            +E     AI +QHE+DHL+G LF+DYLSPLK+Q   +K++K  +  A+
Sbjct: 120 TLEADGLFAICLQHELDHLNGKLFVDYLSPLKRQRIKQKLEKAARLEAK 168