Pairwise Alignments

Query, 168 a.a., peptide deformylase from Vibrio cholerae E7946 ATCC 55056

Subject, 197 a.a., Probable polypeptide deformylase Def (PDF) (formylmethionine deformylase) from Mycobacterium tuberculosis H37Rv

 Score = 75.5 bits (184), Expect = 5e-19
 Identities = 59/177 (33%), Positives = 84/177 (47%), Gaps = 15/177 (8%)

Query: 1   MAVLEILTAPDPRLRVQSKQVTDVA--SVQTLIDDLLDTLYAT---DNGIGLAAPQVGRE 55
           MAV+ I    DP L   +  VT  A  S+   +  L+ T+Y T    NG+GLAA Q+G  
Sbjct: 1   MAVVPIRIVGDPVLHTATTPVTVAADGSLPADLAQLIATMYDTMDAANGVGLAANQIGCS 60

Query: 56  EAIVVIDLSDNRDQPL----VLINPKVVSGS------NKEMGQEGCLSVPDYYADVERYT 105
             + V D + +R        V+INP + +        + +   EGCLSVP       R  
Sbjct: 61  LRLFVYDCAADRAMTARRRGVVINPVLETSEIPETMPDPDTDDEGCLSVPGESFPTGRAK 120

Query: 106 SVVVEALDREGKPLRIETSDFLAIVMQHEIDHLSGNLFIDYLSPLKQQMAMKKVKKH 162
              V  LD +G P+ IE +   A ++QHE  HL G L++D L     + A + VK H
Sbjct: 121 WARVTGLDADGSPVSIEGTGLFARMLQHETGHLDGFLYLDRLIGRYARNAKRAVKSH 177