Pairwise Alignments

Query, 168 a.a., peptide deformylase from Vibrio cholerae E7946 ATCC 55056

Subject, 181 a.a., polypeptide deformylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 68.9 bits (167), Expect = 4e-17
 Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 8/165 (4%)

Query: 4   LEILTAPDPRLRVQSKQVTDVASVQTLIDDLLDTLYATDNGIGLAAPQVGREEAIVVIDL 63
           L I    +  L+ Q+ +V D     + +   +        G+G+AAPQV    A+ ++  
Sbjct: 14  LPIAVVGEAILKQQAIEVRDFDDTLSQLASQMAASMVEAKGVGIAAPQVHSPLALFIMAS 73

Query: 64  SDNRD-------QPLVLINPKVVSGSNK-EMGQEGCLSVPDYYADVERYTSVVVEALDRE 115
             N         +PLV++NP++V  S + E G+EGCLSVP     + R  ++VV   +  
Sbjct: 74  RPNERYPDAPLMEPLVVVNPQIVLRSLQLEKGEEGCLSVPGQRFTIWRPQTIVVRYQNLA 133

Query: 116 GKPLRIETSDFLAIVMQHEIDHLSGNLFIDYLSPLKQQMAMKKVK 160
           G+    E + F+A + QHE DHL G   ++     +Q++  ++ K
Sbjct: 134 GQWQHSELTGFIARIFQHEFDHLQGITLLERSQMPEQKLMAQEGK 178