Pairwise Alignments

Query, 168 a.a., peptide deformylase from Vibrio cholerae E7946 ATCC 55056

Subject, 168 a.a., polypeptide deformylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  158 bits (399), Expect = 5e-44
 Identities = 80/169 (47%), Positives = 113/169 (66%), Gaps = 2/169 (1%)

Query: 1   MAVLEILTAPDPRLRVQSKQVTDV-ASVQTLIDDLLDTLYATDNGIGLAAPQVGREEAIV 59
           MA+L++L  PD RLR Q+  +T+  A +QT IDD+ +T+Y  + GIGLAA QV   + ++
Sbjct: 1   MALLKVLRFPDERLRTQATPITEFNAELQTQIDDMFETMYQ-EKGIGLAATQVDYHKQLI 59

Query: 60  VIDLSDNRDQPLVLINPKVVSGSNKEMGQEGCLSVPDYYADVERYTSVVVEALDREGKPL 119
           V+DL D  ++P V INP++++ S     +EGCLSVP  YA V+R   V V+ALDR G   
Sbjct: 60  VMDLQDEVERPKVFINPEIIASSGDFCNEEGCLSVPGIYAKVDRAEFVTVKALDRHGNEF 119

Query: 120 RIETSDFLAIVMQHEIDHLSGNLFIDYLSPLKQQMAMKKVKKHVKNRAR 168
            +E  D  AI +QHE+DHL G LF+DYLSPLK+Q   +K++K  K  A+
Sbjct: 120 TVEADDLFAICIQHEMDHLKGKLFVDYLSPLKRQRIKQKLEKAAKQDAK 168