Pairwise Alignments

Query, 168 a.a., peptide deformylase from Vibrio cholerae E7946 ATCC 55056

Subject, 175 a.a., peptide deformylase from Sphingomonas koreensis DSMZ 15582

 Score =  125 bits (314), Expect = 4e-34
 Identities = 77/176 (43%), Positives = 108/176 (61%), Gaps = 10/176 (5%)

Query: 1   MAVLEILTAPDPRLRVQSKQVTDVAS-VQTLIDDLLDTLYATDNGIGLAAPQVGREEAIV 59
           MA+L IL  PDPRL++ S  V  V   ++ LI D+ +T+Y    GIGLAA QVG  + +V
Sbjct: 1   MAILPILEVPDPRLKLVSTPVDKVDDELRALIADMFETMYDAP-GIGLAAIQVGVPKRLV 59

Query: 60  VIDLSDNRD-------QPLVLINPKVVSGS-NKEMGQEGCLSVPDYYADVERYTSVVVEA 111
           V+DL +  D       QP V +NP+++  S ++    EGCLSVPD YADV+R  +  V+ 
Sbjct: 60  VMDLQEEEDEDGKPIRQPRVFVNPEILEPSADQNTYSEGCLSVPDQYADVDRPATCRVKW 119

Query: 112 LDREGKPLRIETSDFLAIVMQHEIDHLSGNLFIDYLSPLKQQMAMKKVKKHVKNRA 167
           LD  GK      +  LA  +QHE+DHL G +F+D+LS LK++M M+K+ K  K  A
Sbjct: 120 LDEHGKAHDEVFTGLLATCIQHEMDHLEGIVFLDHLSRLKREMIMRKLNKARKAAA 175