Pairwise Alignments

Query, 403 a.a., L-2-hydroxyglutarate oxidase from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., FAD dependent oxidoreductase (RefSeq) from Shewanella loihica PV-4

 Score =  147 bits (370), Expect = 7e-40
 Identities = 113/398 (28%), Positives = 185/398 (46%), Gaps = 46/398 (11%)

Query: 4   DYVIVGGGIVGVSTGWQLKRRYPEKSVLLIEKEAGFSRHQTGHNSGVIHAGVYYAPGSLK 63
           D +++G G+VG++    L RR+   +VL+I++        +  NS VIHAG+YY  GSLK
Sbjct: 5   DAIVIGAGVVGLAVAASLSRRFG--NVLIIDRAETIGTGISSRNSEVIHAGIYYPTGSLK 62

Query: 64  ADFCKRGVERTLAFCAQHNIPVENCGKLLVATNEQELERMHALYDRCLQNQI-DVEKLDA 122
           A  C  G  +  A+C +  + V + GKL+VAT  ++  ++ AL+ +   N + D+  L  
Sbjct: 63  AQLCVEGKRQLYAYCRRRGVAVNSLGKLIVATQVEQEAQLDALFTQARANGVDDLNPLGR 122

Query: 123 AQLKLAEPNIRGLGAILVKATSIV-NYRLVTEKMAEAFMQLGGDVKIGTEVVGLEETPSS 181
            QL+  EP ++    +L  +T IV ++ L+   +AEA  + G      TE +  +   + 
Sbjct: 123 RQLQALEPALKASAGLLSPSTGIVDSHGLMLSLLAEA-EEYGAIFCPHTEFITTQADANG 181

Query: 182 ITLTCQQKNQRVSYQAKFLVTCSGLMADRL-TKMLGLPTDF--QIIPYRGEYYRLAPKHN 238
             +   Q+ +RVS +  FL+ C+GL A  + T++ GL      Q+   +G Y+  A +  
Sbjct: 182 FRVELMQQGERVSLETSFLINCAGLFATEVATRIEGLAESLVPQLYWCKGHYF--AYQGK 239

Query: 239 QVVRHLIYPIPDPELPFLGVHLTRMIDGCVTVGPNAVQGFKREGYGKWNVSLRDVWEMVC 298
               HLIYP+P+P L  LG+H T  + G +  GP+A               + D  E   
Sbjct: 240 SPFAHLIYPVPEPGLKGLGIHATIDLGGQLKFGPDA------------QYMVPDSLEDYR 287

Query: 299 FPGFWKVSAKHFKTGMVEMKNSWWKAGYLQLVRKYCPSIELTDLEPYPAGIRAQAVLSDG 358
            P                      +  + Q +  Y P I +  L+   AGIR +    D 
Sbjct: 288 VP-------------------EALRQRFHQAIASYYPGIAIERLQTAYAGIRPKLQGPDD 328

Query: 359 TLVHDFLFAES-----PRSLHVCNAPSPAATSAMPIGE 391
           T V DFL         P  +++    SP  T+++ I E
Sbjct: 329 TEVADFLIQGEAQHGIPGLVNLLGIESPGLTASLAIAE 366