Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Xanthomonas campestris pv. campestris strain 8004

 Score = 76.6 bits (187), Expect = 2e-18
 Identities = 71/301 (23%), Positives = 134/301 (44%), Gaps = 24/301 (7%)

Query: 196 MFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSVANTVSTGV 255
           +FI  G  ++R G+ + ++ ++ +  G+V GG G ++VL+S   G VSGS++A+  + G 
Sbjct: 60  LFIFAGELMLRGGISERLIALASSLVGRVRGGLGQVSVLSSLFFGGVSGSAIADVSAVGG 119

Query: 256 ITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDIVAVSFIPA 315
             IP M K G+   +A  V   A+    L+PP      F  A+   +   D+ A   +PA
Sbjct: 120 TMIPQMIKRGYDRDYAVNVSMTAALVALLVPPSHNLILFSAAAGGGLSIADLFAAGIVPA 179

Query: 316 LIYFLSVAFFVRIEAKRMGVQIVTTSQEPFMKVLLSGWHNLIPLAVLVTLLVVG-----F 370
           L+   ++       A+  G     T   P  + +       +P   LV L+ +G     F
Sbjct: 180 LLMTAAMMVTGYAVARHRG---YGTEPFPGWRAVALRLFGALPGLGLVALIFIGIRAGIF 236

Query: 371 TPTYAAGLSIL-SVIVASWFSKNHKMGPKAIIEALEQGAKNMATTAVLLVGI------GL 423
           T   +A ++++ ++IV +   +  +        A+   A+   TT V+L  I      G 
Sbjct: 237 TAVESAAIAVVYALIVTALLYRQLRWA--EFFAAVTHAAR---TTGVILFVIATAAVFGW 291

Query: 424 VINVISTTGIGNTFSLMINNWANGDLLTMLVLITLASLVLGMGLPVTAAYIVLGTLSAPA 483
           ++  +        F   I +  N    T+L++I +  L+LGM + +    ++   +  P 
Sbjct: 292 LLAYLQVPAAAVKFLQAIADSKN----TVLLMIVVMLLLLGMFMDLAPKILICTPIFLPV 347

Query: 484 L 484
           +
Sbjct: 348 V 348