Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., TRAP transporter large permease subunit from Synechocystis sp000284455 PCC 6803

 Score = 79.0 bits (193), Expect = 5e-19
 Identities = 97/408 (23%), Positives = 173/408 (42%), Gaps = 54/408 (13%)

Query: 182 MFGSIAAISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGS 241
           +FG +A  +   +  FI  G+ L RSG+ + +++      G + GG     +L   ++ +
Sbjct: 58  IFGIMANGTLLAIPFFIFLGSMLERSGIAEQLLETMGIILGHLRGGLALAVILVGTMLAA 117

Query: 242 VSGSSVANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQ 301
            +G   A  V+ G+I++P+M + G+    A+GV  A+ T GQ++PP       ++A    
Sbjct: 118 TTGVVAATVVAMGLISLPIMLRYGYSKELASGVIVASGTLGQIIPP--SVVLIVLADQLG 175

Query: 302 IPYVDIVAVSFIPALIYFLSVAFFVRI--------------EAKRMGVQ-----IVTTSQ 342
           +   D+   S +P L+   S A +V I              E + +G Q     IV    
Sbjct: 176 VSVGDLFIGSLLPGLMMAGSFALYVLIIAWLKPDLAPALPAEVRNIGGQELRRRIVQVML 235

Query: 343 EPFMKVLLSGWHNLIPLAVLVTLLVVGFTPTYAAGLSILSVIVASWFSKNHKMGPKAIIE 402
            P + +LL          VL ++     +PT A  +  +  I  + F  N ++  KA+ E
Sbjct: 236 PPLVLILL----------VLGSIFFGIASPTEAGAVGSIGAIALAHF--NQRLNWKALWE 283

Query: 403 ALEQGAKNMATTAVLLVGIGLVINVISTTGI-GNTFSLMINNWANGDLLTMLVLITLASL 461
             +  A    T+ V+L+ +G     +   G+ G+ F   +     G  +  L +  +   
Sbjct: 284 VCD--ATLRITSMVMLILLGSTAFSLVFRGLEGDRFMFDLLANLPGGQIGFLAISMITIF 341

Query: 462 VLGMGLP-VTAAYIVLGTLSAPALYKLLAESQLVDLMVSGQLPEQAKAIFMLAAPDQLSL 520
           +LG  +     A+IVL       L+K +AE+  +DL+  G          ++ A  Q S 
Sbjct: 342 ILGFFIDFFEIAFIVL------PLFKPVAEALNLDLIWYG---------VIVGANLQTSF 386

Query: 521 LNAPMAAEKAHELISLVPADFVETLLQQSLGLEAIGLALLSAHLIIFW 568
           L  P      + L  + PA      + +   +  IGL +L   LII +
Sbjct: 387 LTPPFGFALFY-LRGVAPASLTTGQIYRG-AVPFIGLQVLVLLLIIIF 432