Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., transmembrane protein from Sinorhizobium meliloti 1021

 Score = 88.2 bits (217), Expect = 7e-22
 Identities = 74/287 (25%), Positives = 136/287 (47%), Gaps = 13/287 (4%)

Query: 197 FILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSVANTVSTGVI 256
           FIL G+ ++   +G  ++  + A  G+  GG G + V+ S + G VSGS+VA   + G +
Sbjct: 61  FILSGSLMMSGTLGQKLVQFAAALVGRFHGGMGQVTVVGSTIFGGVSGSAVAEASALGSM 120

Query: 257 TIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDIVAVSFIPAL 316
            IP  KK G+PA FAA V A++ST   L+PP +    F   + + I    + + + +P L
Sbjct: 121 LIPWQKKEGYPAGFAAAVTASSSTIAGLIPPSIPLILFSTVANSSI--ASLFSAAVLPGL 178

Query: 317 IYFLSVAFFVRIEAKRMGVQIVTTSQE--PFMKVLLSGWHNLIPLAVLVTLLVVGF-TPT 373
           +    +     +  +      +T + +   F + +LS    L     ++ LL  G  TPT
Sbjct: 179 MLAGGMMIVCYLSGRIRNFPRLTDAGQLKSFGRSMLSALPALAMPFFIILLLRAGIATPT 238

Query: 374 YAAGLSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTAVLLVGIGLVINVISTTGI 433
             + +++   ++ S       +  + I  AL           +++    LV +V+ T  +
Sbjct: 239 EVSVIAVFYALLVS-LLLYRDLTWERIYAALVGTVITTGVVMLVIAASSLVGHVLITERV 297

Query: 434 GNTFSLMINNWA---NGDLLTMLVLITLASLVLGMGLPVTAAYIVLG 477
                 ++ NWA    G  + +++++ L  LV+GM L + AA ++LG
Sbjct: 298 ----PTIVANWALETLGSAILIILMMNLIMLVVGMFLDLPAAILLLG 340