Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 92.4 bits (228), Expect = 4e-23
 Identities = 85/337 (25%), Positives = 151/337 (44%), Gaps = 19/337 (5%)

Query: 196 MFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSVANTVSTGV 255
           +FI  G  +  SG+ D I   +    G++ GG   + V  S +   +SG+++A+    G 
Sbjct: 59  LFIFVGNLMNLSGITDRIFRFAYTLVGRMPGGLAQVNVFGSLIFSGMSGAALADIGGLGR 118

Query: 256 ITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDIVAVSFIPA 315
           I I  MKK GF   FA  V AA++T G + PP       +  S T +  V ++    +PA
Sbjct: 119 IEIDAMKKRGFDPSFAGAVTAASATLGPIFPP--SIPLIVYGSVTSVSIVQLLVAGIMPA 176

Query: 316 LIYFLSVAFFVRIEAKRMGVQIVTTSQEPFMKVLLSGWHNLIPLAVLVTLLVVG------ 369
           ++    +   V I A R G       + P    L+      +P A+L   L+VG      
Sbjct: 177 VLCTALLMLTVLIVAIRHG--HARAERWPTAGELVGTLVPALP-AILAPALMVGGMTAGA 233

Query: 370 FTPTYAAGLSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTAVLLVGIGLVINVIS 429
           FTPT AA ++ + VI  S      ++ P  +  +    A++ +   +++    L   +++
Sbjct: 234 FTPTEAAAITAVYVIFISGV-LYRELTPAHLWHSAVLTARSSSAILIIVASAALFGWILA 292

Query: 430 TTGIGNTFSLMINNWANGDLLTMLVLITLASLVLGMGLPVTAAYIVLGTLSAPALYKL-- 487
              +  TF+  +  W+  D L +L++  L   V GM L  T A ++L  + AP L     
Sbjct: 293 VEQVPQTFAAALLGWSK-DPLMLLIIANLIFFVAGMFLDSTTATLLLVPIIAPPLVMAGV 351

Query: 488 ----LAESQLVDLMVSGQLPEQAKAIFMLAAPDQLSL 520
               L    + +LM+    P    ++F+++   ++S+
Sbjct: 352 DPVQLGIVTIFNLMLGLLTPPMGLSLFLVSDIAKVSI 388