Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 827 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  214 bits (546), Expect = 1e-59
 Identities = 173/610 (28%), Positives = 282/610 (46%), Gaps = 58/610 (9%)

Query: 54  AIHFAGFAMICALWYPALPRWRGSKVALAFDVLLALLALACLIYLMLAEDALYERGVKFV 113
           AIH      +  L YPAL      +V LA  VL AL A A   YL L    L  R  +  
Sbjct: 30  AIHLGFALFLTFLAYPALKSSPRDRVPLADWVLGALGAFAGA-YLFLFYGELAGRPGQPS 88

Query: 114 TSDWVFSILAILIVMEMIRRTMGWFIPTLILICLTYVSVWGKWAGGIFHFPGLSAETLLY 173
           T D V     IL+++E  RR +G  +  +  + + Y    G++   +    G S    + 
Sbjct: 89  TLDLVTGTAGILLLLEATRRALGLPMVFVAGVFIFYTFA-GQYMPDVIQHRGASLVKFIN 147

Query: 174 RSFYSSEGMFGSIAAISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAV 233
             + ++EG+FG    +S SFVF+F+LFG  L ++G G+++M +S A  G + GGP  +AV
Sbjct: 148 HQWLTTEGVFGIALGVSTSFVFLFVLFGTLLEKAGAGNWMMQISIALLGHLRGGPAKVAV 207

Query: 234 LASGLMGSVSGSSVANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGA 293
           ++S L G VSGSSV+N VS G+ TIP+MK+ G     A  +EA+AS  GQ+MPPVMGA A
Sbjct: 208 VSSALNGVVSGSSVSNVVSGGIFTIPLMKRTGLSGVKAGAIEASASINGQIMPPVMGAAA 267

Query: 294 FIMASYTQIPYVDIVAVSFIPALIYFLSVAFFVRIEAKRMGVQIVTTSQEPFMKVLLSGW 353
           F+M  Y  IPY +IV  + +PA+  ++++ + V +EA ++ +Q +     P  +  L   
Sbjct: 268 FLMVEYVGIPYSEIVKHALLPAVFSYIALLYMVHLEAVKLNMQPIPQRPTPMRERWLRMG 327

Query: 354 HNLIPLAVLVTLLVVGF----------TPTYAAGLSILSVIVASWFSKNHK----MGPKA 399
             L    + + LL  G            P   A   +   I   W+S  +       P A
Sbjct: 328 LGLAGSVLAICLLYYGIIAIRAAFGESAPLLLAIAGVALYIATIWYSSRYPDLELDDPDA 387

Query: 400 IIEALEQGAKNMATTAVLLVGIGLVINVISTTGIGNTFSLMINNWANGDLLTMLV----- 454
            I  L +      T    L+ I +++  +    +    S     WA   ++ ++      
Sbjct: 388 PILELPRAWDVTRTGLDFLIPIVVLLWCLMVEQLSPGLSAF---WATLTIIAIVATRKPL 444

Query: 455 -----------------------LITLASLVLGMGLPVTAAYIVLGTLSAPALYKLLAES 491
                                  L   A  ++G+ +    A IV+GT++   L  ++ E 
Sbjct: 445 MAIFRKEDVAGSVRAAAWDLTDGLALGARNMIGIAVATATAGIVVGTITLTGLGLMMTE- 503

Query: 492 QLVDLMVSGQLPEQAKAIFMLAAPDQLSLLNAPMAAEKAHELISLVPADFVETLLQQSLG 551
            LV+ +  G +      + ++AA   +  +  P  A   + L++ + A  V  L  Q+  
Sbjct: 504 -LVEFISGGNV---IMMLILIAAISLVLGMGIPTTAN--YILVATLMAPVVVELGSQA-- 555

Query: 552 LEAIGLALLSAHLIIFWLSQDSNVTPPVCLTAFAAATIAKTPPMRTGFTAWKIAKGLYLV 611
              + + L++ HL +F+    +++TPPV L AFAAA I+K  P+ TGF     +    ++
Sbjct: 556 --GLAIPLIAVHLFVFYFGIMADITPPVGLAAFAAAAISKEDPIATGFQGALYSLRTAIL 613

Query: 612 PVLIAYTQLI 621
           P +  +   I
Sbjct: 614 PFVFIFNPAI 623