Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., TRAP dicarboxylate transporter, DctM subunit (NCBI) from Rhodospirillum rubrum S1H

 Score = 86.7 bits (213), Expect = 2e-21
 Identities = 77/315 (24%), Positives = 140/315 (44%), Gaps = 20/315 (6%)

Query: 182 MFGSIAAISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGS 241
           +F  I       +  FIL G FL   GV   +++ + A  G   GG G   V+A  L  +
Sbjct: 47  LFTGIEKFEIMAIPFFILAGNFLTHGGVAKRMINFATAMVGHWYGGLGLGGVVACALFAA 106

Query: 242 VSGSSVANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQ 301
           +SGSS A  V+ G I +P M K GFP RF AGV   +   G L+PP +    + +A+ T 
Sbjct: 107 ISGSSPATVVAIGSILLPAMVKQGFPRRFGAGVITTSGALGILIPPSLVMVMYAVATNTS 166

Query: 302 IPYVDIVAVSFIPALIYFLSVAFFVRIEAK-----RMGVQIVTTSQEPFMKVLLSGWHNL 356
           +  + +  V  +P L+    +     + A+     R+      T  + F + +   W  +
Sbjct: 167 VGALFMAGV--VPGLVLATLLGVTTSVIARKNNYPRLPKASWATRAKAFREAI---WGLM 221

Query: 357 IPLAVLVTLLVVGFTPTYAAGLS-ILSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTA 415
           + + V+  +    FTPT AA +S + + ++A +  K+  M  + +++ L   A   A   
Sbjct: 222 LVVIVIGGIYSGIFTPTEAAAMSAVYAFLIAVFVYKD--MPLRGVVKILLSSASMSAMLL 279

Query: 416 VLLVGIGLVINVISTTGIGNTFSLMINNWANG---DLLTMLVLITLASLVLGMGLPVTAA 472
            ++    L   V++   I       I +W  G    ++  L+++ +  L  G  +  ++ 
Sbjct: 280 YIITNAVLFSFVLANENIPQA----IADWIVGKELGIVAFLLVVNVLLLAAGNFMEPSSI 335

Query: 473 YIVLGTLSAPALYKL 487
            +++  +  P   KL
Sbjct: 336 VLIMAPILFPVAMKL 350