Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., TRAP dicarboxylate transporter, DctM subunit (NCBI) from Rhodospirillum rubrum S1H

 Score = 93.2 bits (230), Expect = 2e-23
 Identities = 85/307 (27%), Positives = 144/307 (46%), Gaps = 13/307 (4%)

Query: 182 MFGSIAAISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGS 241
           ++  IA      + +FIL G    R GV   ++  + +  G   GG   +AVL   +MG 
Sbjct: 46  VYAGIAKYPLLAIPVFILAGLIFERVGVARQLVSFASSIVGARNGGLAIVAVLVCMVMGG 105

Query: 242 VSGSSVANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQ 301
           +SGS  A+  +   + IP + KAG+P  F+A V AA +    L+PP +   AFI+ S   
Sbjct: 106 ISGSGPADAAAVATVMIPSLHKAGYPKAFSASVIAAGAATAILIPPSV---AFIIYS-VL 161

Query: 302 IPYVDIVAV---SFIPALIYFLSVAFFVRIEAKRMGVQIVTTSQEPFMKVLLSG--WHNL 356
           +P   + A+     IP L+  LS+   +   ++R G  +  +   P   V L G  W  L
Sbjct: 162 VPQASVPALFAGGLIPGLLAGLSLLAPIVYLSRRHGFGMADSGPRPGFWVSLKGAIWGLL 221

Query: 357 IPLAVLVTLLVVGFTPTYAAGLSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTAV 416
            P+ +L  L +  FTPT AA +++   +    F      G + +I+ L   A+ M+   +
Sbjct: 222 APVIILGGLRLGLFTPTEAAVVAVFYGLFVGVFILRTLSG-RMLIDMLADAAE-MSGVVL 279

Query: 417 LLVGIGLVIN-VISTTGIGNTFSLMINNWANGDLLTMLVLITLASLVLGMGLPVTAAYIV 475
           L++ +  V     ST G  +  +       + +++ +L+L  L  L LGM L   + +++
Sbjct: 280 LIIALASVFAWAGSTLGAFDAVAGAALQATDNEVVVLLML-NLLLLGLGMVLDAVSIFLI 338

Query: 476 LGTLSAP 482
           L  L  P
Sbjct: 339 LLPLLVP 345