Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., TRAP transporter, subunit DctM from Phaeobacter inhibens DSM 17395

 Score = 78.2 bits (191), Expect = 8e-19
 Identities = 83/365 (22%), Positives = 153/365 (41%), Gaps = 32/365 (8%)

Query: 135 MGW--FIPTLILICLTYVSVWGKWAGGIFHFPGLSAETLLYRS-----FYSSEGMFGSIA 187
           +GW  ++P ++ + L  ++V   WA       G +A T+L  S         E +F  I 
Sbjct: 12  LGWDFYLPVILFVALIALAV-PVWAA-----IGAAAITMLVMSGDLPLSAIGESLFTGID 65

Query: 188 AISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSV 247
           A + + V +FIL G  LVR+G+    +DV+ A      GG G   VL  G+  ++SGS  
Sbjct: 66  AFALTAVPLFILTGDVLVRTGLSKKFLDVAEALTCWTRGGFGSATVLVCGMFAAISGSDA 125

Query: 248 ANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPP---------VMGAGAFIMAS 298
           A   + G +TI  + ++G+P  +A  + AA +  G L+PP         V+G  A  +  
Sbjct: 126 AGAAAVGRMTIARLVESGYPRPYACALVAAGACTGILIPPSIAYIIIGLVLGISASTLFL 185

Query: 299 YTQIPYVDIVAVSFIPALIYFLSVAFFVRIEAKRMGVQIVTTSQEPFMKVLLSGWHN-LI 357
              IP + I+ VS +   I    +  +       +G  +    Q      L SGW+  ++
Sbjct: 186 AALIPGIAIL-VSILVTNIIMNRLYTYETGGNMGLGEWLGNLGQS-----LKSGWYAFIV 239

Query: 358 PLAVLVTLLVVGFTPTYAAGLSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTAVL 417
           P  +   +     TPT A   +++  I+  +     K+     +  L   AK       +
Sbjct: 240 PGIIFYGIFSGRLTPTEAGATAVVVTILMGFLLGTLKLADFPAM--LVSSAKVNGVILPI 297

Query: 418 LVGIGLVINVISTTGIGNTFSLMINNWANGDLLTMLVLITLASLVLGMGLPVTAAYIVLG 477
           +     +   ++  G+   F   +    +   + +L++I +  +  G  +  T   ++L 
Sbjct: 298 IAFSAPLAEALAIMGVPQGFVTAVTGLTDDPSILILLMICIL-IAAGCVMETTPNIVILA 356

Query: 478 TLSAP 482
            +  P
Sbjct: 357 PILKP 361