Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., TRAP transporter, DctM subunit from Dechlorosoma suillum PS

 Score = 95.5 bits (236), Expect = 5e-24
 Identities = 83/309 (26%), Positives = 140/309 (45%), Gaps = 8/309 (2%)

Query: 182 MFGSIAAISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGS 241
           +F  I       +  FIL G FL   GV   +++ + A  G   GG G   VLA  L  +
Sbjct: 47  LFTGIEKFEIMAIPFFILAGNFLTHGGVARRMINFASAMVGHFYGGLGLAGVLACALFAA 106

Query: 242 VSGSSVANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQ 301
           VSGSS A  V+ G I +P M +AGFP RF AGV   +   G L+PP +    + +A+ T 
Sbjct: 107 VSGSSPATVVAIGSILLPAMVRAGFPNRFGAGVITTSGALGILIPPSIVMVMYSVATNTS 166

Query: 302 IPYVDIVAVSFIPALIYFLSVAFFVRIEAKRMGVQIVTTSQ--EPFMKVLLSGWHNLIPL 359
           +  + +  V  IP L+   ++       AK+     +  +   E ++    S W  ++ +
Sbjct: 167 VGALFMAGV--IPGLLLAFTLGMVTWYRAKKFDYPRMPKASWGERWVAFRKSVWGLMLIV 224

Query: 360 AVLVTLLVVGFTPTYAAGLS-ILSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTAVLL 418
            V+  +    FTPT AA +S + + IVA +  K+  MG K I + L   A   A    ++
Sbjct: 225 IVMGGIYTGMFTPTEAAAMSAVYAFIVAVFVYKD--MGLKQIPKVLLDSANMSAMLLYII 282

Query: 419 VGIGLVINVISTTGIGNTFSLMINNWANGDLLTMLVLITLASLVLGMGLPVTAAYIVLGT 478
               L   +++   I    +  + +   G  +  L+ + +  LV G  +  ++  +++  
Sbjct: 283 TNAVLFSFLMTNENIPQLLAEWLLDKGLGP-IAFLLAVNVLLLVAGNFMEPSSIVLIMAP 341

Query: 479 LSAPALYKL 487
           +  P   KL
Sbjct: 342 ILFPVAVKL 350