Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., TRAP transporter, DctM subunit from Dechlorosoma suillum PS

 Score = 82.4 bits (202), Expect = 4e-20
 Identities = 84/305 (27%), Positives = 133/305 (43%), Gaps = 30/305 (9%)

Query: 196 MFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSVANTVSTGV 255
           +F+L G    RSGV   ++  + A  G+  GG    A+L   ++G +SGS  A+  +   
Sbjct: 59  VFVLAGMIFERSGVALRLVRFAVALVGQRRGGLALAAILVCMVLGGISGSGPADAAAVAT 118

Query: 256 ITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMAS--YTQIPYVDIVAVSFI 313
           + IP M +AG+PA F+A V AAA +   L+PP +    FI+ S    Q     + A   I
Sbjct: 119 VMIPSMARAGYPAAFSASVIAAAGSTAILIPPSI---VFILYSVLVPQASVPALFAAGLI 175

Query: 314 PALIYFLSVA-----FFVRIEAKRMGVQIVTTSQEPFMKVLLSGWHNLIPLAVLVTLLVV 368
           P L+  L++        VR      G+Q     Q  +  +  + W  L P+ +L  +   
Sbjct: 176 PGLLAGLALMLPAWWLSVRHGFGVAGLQDGEARQSFWSALKEASWGLLAPVIILGGMRSG 235

Query: 369 GFTPTYAA------GLSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTAVLLVGIG 422
            FTPT AA      GL +  VI  +   KN       I E L + A+  A   +++    
Sbjct: 236 AFTPTEAAVVAVFYGLFVGLVIYRTLNWKN-------IYEVLVESAEVSAVVMLIIALAS 288

Query: 423 LVINVISTTGIGNTFSLMINNW---ANGDLLTMLVLITLASLVLGMGLPVTAAYIVLGTL 479
           +     ST G   TF   +  W    +G+   +L+ +TL  L+ GM L   +   +    
Sbjct: 289 VFAWAGSTLG---TFE-ALGGWLVGLSGNETAILLAVTLLLLIAGMFLDAVSILFIFMPF 344

Query: 480 SAPAL 484
             P +
Sbjct: 345 LLPVI 349