Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 80.5 bits (197), Expect = 2e-19
 Identities = 81/322 (25%), Positives = 142/322 (44%), Gaps = 11/322 (3%)

Query: 196 MFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSVANTVSTGV 255
           +F+L G  +   G+   I+ ++ A  G + GG   ++V+++     VSGS+ A+T + G 
Sbjct: 66  LFMLAGELMSAGGISRRIVALADALVGHLPGGLAAVSVVSAMFFAGVSGSAAADTAAVGS 125

Query: 256 ITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDIVAVSFIPA 315
           I IP M + G+PA  A  V+AA    G ++PP       +  + T      + A   +P 
Sbjct: 126 ILIPAMIRRGYPAPLAGAVQAAGGCIGVIIPP--SIPMIVFGALTGASIGRLFAGGVLPG 183

Query: 316 LIYFLSVAFFVRIEAKRMG-VQIVTTSQEPFMKVLLSG-WHNLIPLAVLVTLLVVGFTPT 373
           L+   S+     +EA+R G V             + SG W    P  +L T++    T T
Sbjct: 184 LLMGASLVALCVVEARRTGRVPERRFDARALWPAIRSGAWALGAPAIILGTIIGGVATAT 243

Query: 374 YAAGLSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTAVLLVGIGLVINVISTTGI 433
            +A +++   +    ++            AL  G  + A   +++    L   V++   +
Sbjct: 244 ESAAMAVAYALPVGLYAHRELRWRDLPRLALCAGVTS-AVVMLIIAAASLFGWVMALERL 302

Query: 434 GNTFSLMINNWANGDLLTMLVLITLASLVLGMGLPVTAAYIVLGTLSAPALYKLLAESQL 493
               +  + +  +GD + +L+L+ L  LV+G  L  TAA +    L  P L  LL  +  
Sbjct: 303 PQAIAAWMLS-LSGDRIVLLLLVNLLLLVVGAFLETTAAIL----LFVPVLVPLL-PALG 356

Query: 494 VDLMVSGQLPEQAKAIFMLAAP 515
           +DL+  G +     AI ML  P
Sbjct: 357 IDLVHLGVIVVVNLAIGMLTPP 378