Pairwise Alignments

Query, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 729 a.a., TRAP transporter for fumarate, succinate, L-malate, and 2-oxoglutarate, fused 4TM/12TM components (from data) from Marinobacter adhaerens HP15

 Score =  287 bits (735), Expect = 1e-81
 Identities = 185/560 (33%), Positives = 294/560 (52%), Gaps = 26/560 (4%)

Query: 33  LLSLAHIWFNTLSTWSELWISAI---------HFAGFAMICALWYPALPRWRGSKVALAF 83
           +L   ++ + T S W  +   A+         HF G+ ++ A     +  W   +    F
Sbjct: 112 MLPALYVLYQTFSFWQMVQNGAMRIPVELEVWHF-GWPLLAATGVGIVMSWFHQRERSVF 170

Query: 84  ---DVLLALLALACLIYLMLAEDALYER--GVKFVTSDWVFSILA-ILIVMEMIRRTMGW 137
              D++L + +LA   Y ++  +       G  F      F+ +A   ++ME+ RR  G 
Sbjct: 171 SVPDLVLIVCSLAVAAYFLVVYNTSMRMSTGTSFAPVGISFAAIAGTALIMELTRRVAGM 230

Query: 138 FIPTLILICLTYVSVWGKWAGGIFHFPGLSAETLLYRSFYSSEGMFGSIAAISWSFVFMF 197
            +  + L+ L YV   G +  G   +PGLS +   +   Y+  G+ G   A+S +++ +F
Sbjct: 231 ALVIIGLVFLAYVFA-GPYLPGFLGYPGLSVQRF-FSQVYTDAGILGPTTAVSSTYIILF 288

Query: 198 ILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSVANTVSTGVIT 257
           I+F AFL  S VGDY ++ + AAAG+  GGP  +++ ASGLMG ++G+S  N VSTG +T
Sbjct: 289 IIFAAFLQSSKVGDYFVNFAFAAAGRSRGGPAKVSIFASGLMGMINGTSAGNVVSTGSLT 348

Query: 258 IPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDIVAVSFIPALI 317
           IP+MKK G+  + A  VEAAASTGGQ+MPP+MGAGAFIMA  T IPY +I   + IPA++
Sbjct: 349 IPLMKKVGYSKQSAGAVEAAASTGGQIMPPIMGAGAFIMAEITGIPYTEIAIAAIIPAIL 408

Query: 318 YFLSVAFFVRIEAKRMGVQIVTTSQEPFMKVLLSGWHNLIPLAVLVTLLVVGFTPTYAAG 377
           YF SV F V  EA + G++ +   + P ++ ++   +  +P+ +L+  L +G++   A  
Sbjct: 409 YFASVYFMVDFEAAKTGMRGMREDELPKLRTMMKQCYLFVPIIILIVALFMGYSVIRAGT 468

Query: 378 LSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMATTAVLLVGIGLVINVISTTGIGNTF 437
           L+ +S  V SW S N KMG + I++ALE  +       V+    G+++ VIS TG+G  F
Sbjct: 469 LATVSAAVVSWLSPN-KMGLRHILQALEIASYMAIQIIVVCAAAGVIVGVISLTGVGARF 527

Query: 438 SLMINNWANGDLLTMLVLITLASLVLGMGLPVTAAYIVLGTLSAPALYKLLAESQLVDL- 496
           S+++ + A    L  L+     S++LGMG+P TAAY V  ++ AP L +L  E       
Sbjct: 528 SVLLLDVAATSQLLALIFAMFISILLGMGMPTTAAYAVAASVVAPGLVQLGIEPLTAHFF 587

Query: 497 -----MVSGQLPEQAKAIFMLAAPDQLSLLNAPMAAEKAHELISLVP-ADFVETLLQQSL 550
                +VS   P  A A +  A     + +   +A+ +      +VP   F    L    
Sbjct: 588 VFYFAVVSAITPPVALASYAAAGISGANAMETSVASFRIGIAAFIVPFMFFYNGALLMEA 647

Query: 551 GLEAIGLALLSAHLIIFWLS 570
           G   I  AL++A   ++ LS
Sbjct: 648 GWFEIARALVTATFGVYMLS 667